Gene PG0020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPG0020 
Symbol 
ID2552413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePorphyromonas gingivalis W83 
KingdomBacteria 
Replicon accessionNC_002950 
Strand+ 
Start bp23522 
End bp24226 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content50% 
IMG OID637148838 
ProductMarR family transcriptional regulator 
Protein accessionNP_904377 
Protein GI34539898 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.965636 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTACA AAAAACTGCT TTTCGATCTT ATTGACTACC TCGATGCATT TGAAAGTTTG 
CACGACGGAG GCTCGCACGA ACCCGAAATA AAAGACTTTG CCGACTTTTT AAGTTGGCGC 
TGTGGCAAAA AGAAGAAACA GGAGGAAGAA GTTGTCTCTG TCACCCGGGA ACGAGCAGCA 
GGAGCTAAGA ACATAGCGCG AGGGGTCAGC CTCCTCCATC GTTATTCCCG TTTTTATATC 
AAGAAAGCTC TGACGGAATC TCCATTACAG ACCGAAGACG AATATACCTA TCTGGTCAGC 
CTGATGAACG GTGAGAGCAT GACCAAGACA GAGCTGAACA ACCTCAATGC CATGGAAAAA 
ACATCCGGCG CAGAAGTCAT GCGTCGTCTG CTGAAAGCTA ATCTGATCGA GCAGAGACCG 
GATGAGGAGG ATCGCAGAAG TATGCGTGTC TCCATTACCC CTGAGGGAAG AAAGGTACTG 
GTCAATCTCT TTCCCAACCT GCGCCTTTGT GCCGAGACAC TCGTTTCCGC CCTGTCGGAC 
GAACAGCTGA CCGCCTTCGA TCATCTGCTC TGGTTGCTAT GCGAATGCCA CAACGAGATG 
TTCACCGGCA AACATGATGC CGAGTTGACG GATTTGCATG CGGAGACCTG TGGATTGAAG 
CAATCGGCAG GGGGAGCTTT GTCCAAGCGA CTATACCGCC GCTGA
 
Protein sequence
MKYKKLLFDL IDYLDAFESL HDGGSHEPEI KDFADFLSWR CGKKKKQEEE VVSVTRERAA 
GAKNIARGVS LLHRYSRFYI KKALTESPLQ TEDEYTYLVS LMNGESMTKT ELNNLNAMEK 
TSGAEVMRRL LKANLIEQRP DEEDRRSMRV SITPEGRKVL VNLFPNLRLC AETLVSALSD 
EQLTAFDHLL WLLCECHNEM FTGKHDAELT DLHAETCGLK QSAGGALSKR LYRR