Gene PG0004 details

Gene Information

• Locus tag: PG0004
• ID: 2552205
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: +
• Start bp: 3108
• End bp: 3812
• Gene Length: 705 bp
• Protein Length: 234 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 637148822
• Product: NAD-dependent deacetylase
• Protein accession: NP_904363
• Protein GI: 34539884
• COG category: [K] Transcription
• COG ID: [COG0846] NAD-dependent protein deacetylases, SIR2 family

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 10
• Fosmid unclonability p-value: 0.0079912
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGAATAAGA AAAGACTCGT CGTCTTGAGT GGCGCAGGCA TGAGTGCCGA AAGCGGCATA 
TCGACTTTTC GTGATGCCAA CGGATTGTGG GAGAATTATC CCGTCGAGGA TGTGGCCTCT 
ATCGATGGGT TTAGGCGCAA TCCTGCCCTC GTTCTCAAGT TCTACAATGC ACGCCGACGC 
GACTATGCCG GTTGCAAACC GAATGCAGGC CATATTGGTT TGGCGGAAAT GGAGAAGGAG 
TATGATGTAA GAATCATCAC GCAGAATGTG GATGATCTGC ACGAGAGAGC AGGCAGCACA 
CACGTCATTC ATCTGCACGG AGAGTTGATG AAGAACAGAT CTGTGGCCAC AGACAGTGTG 
CTCTATCCCG TAGACCCGAC CAATCCCGAT CTGCATGTAG GAGATCTGGC ACCCGACGGC 
TGTCAGCTAC GGCCGTTTAT TGTGTGGTTT GGAGAAGCTG TTCCGATGAT AGAGCCGGCC 
ATCGAAGAGG TAACACAGGC AGACATTCTC GTTGTCATCG GCACCTCTCT CAACGTTTAT 
CCGGCTGCCG GACTGTTGAA TTATGCTCCT CGCAACTGCC CCATCTATCT GATCGATCCA 
AAGCCTGTGC GCAGCACCTC CCGGCAAGAC ATTCGGTATA TCCATGCTCC TGCCACGGAA 
GGCGTAAGGA TGTTGCGGCA AGAACTCCGT GATATAGATC GCTAA 

 

Protein sequence

MNKKRLVVLS GAGMSAESGI STFRDANGLW ENYPVEDVAS IDGFRRNPAL VLKFYNARRR 
DYAGCKPNAG HIGLAEMEKE YDVRIITQNV DDLHERAGST HVIHLHGELM KNRSVATDSV 
LYPVDPTNPD LHVGDLAPDG CQLRPFIVWF GEAVPMIEPA IEEVTQADIL VVIGTSLNVY 
PAAGLLNYAP RNCPIYLIDP KPVRSTSRQD IRYIHAPATE GVRMLRQELR DIDR