Gene PCC8801_0278 details

Gene Information

• Locus tag: PCC8801_0278
• ID: 7104829
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 8801
• Kingdom: Bacteria
• Replicon accession: NC_011726
• Strand: +
• Start bp: 260166
• End bp: 262016
• Gene Length: 1851 bp
• Protein Length: 616 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 643473388
• Product: ATP-dependent metalloprotease FtsH
• Protein accession: YP_002370534
• Protein GI: 218245163
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCAAAA ATAATAAAAA ATGGCGTAAT GCCGGACTAT ATGCACTATT GTTAATTGTT 
GTTTTAGCCT TAGCTTCCGC CTTTTTTGAT CAACAGCCCC AAAGCCGAGA ACCCCTGACC 
TATACCGAGT TTATTAATCA AGTAGAAAAT AATCAAATCA CCCGCGTTAG CCTAAGTGCT 
GATCGCGCCG AAGCCAGAGT CCCCAACCCC AACGGGGGAG CCCCCTTAGT GGTTAACTTA 
CCCAATGATC CTGATTTAAT CAACATTTTG ACCAAACACA ACGTTGATAT CTCAGTTCAA 
CCCCAAACCG ACGAAGGGTT ATGGTTTCGG GTAGCCAGTA GCCTCTTTCT CCCCATCCTA 
CTCTTAGTCG GACTCTTCCT CCTTTTACGT CGTGCCCAAA GCGGCCCCGG TTCCCAAGCG 
ATGAACTTTG GCAAGTCCAA AGCGCGAGTC CAAATGGAAC CCCAAACCCA AGTTACCTTT 
GGCGATGTTG CAGGGATCGA ACAAGCTAAA CTCGAACTCG CTGAAGTCGT AGACTTCCTG 
AAAAACGCCG ATCGCTTCAC TGCCATTGGT GCAAAAATTC CCAAAGGAGT CCTCTTAGTT 
GGCCCTCCAG GGACGGGTAA AACCCTCTTA GCTAAAGCCG TCGCCGGAGA AGCCGGAGTC 
CCTTTCTTCT CCATCTCTGG GTCAGAATTT GTGGAAATGT TCGTCGGGGT GGGTGCATCT 
CGCGTTCGGG ATCTCTTTGA ACAAGCCAAA GCCAACGCCC CTTGTATCGT CTTCATCGAT 
GAAATTGATG CCGTTGGTCG CCAACGGGGG GCTGGTTTAG GCGGTGGTAA CGACGAACGG 
GAACAAACCC TCAACCAATT ACTCACCGAA ATGGACGGGT TTGAAGGCAA TACCGGCATT 
ATCATCATCG CTGCGACTAA CCGTCCCGAT GTCCTCGATG CTGCCCTATT GCGTCCGGGT 
CGTTTTGACC GTCAAGTGGT GGTTGATCGC CCCGACTATG CGGGTCGTCA GGAAATTCTC 
AAAGTTCACG CCCGTGGCAA AACCCTCTCC AAAGACATCG ACCTCGATAA AATTGCCCGT 
CGTACCCCTG GCTTTACGGG GGCTGACCTC TCCAACCTGT TAAACGAAGC CGCTATTTTG 
GCTGCCCGTC GCAACTTGAC CGAAATTTCC ATGGATGAGG TCAATGACGC GATCGACCGC 
GTTTTAGCCG GTCCTGAGAA GAAAAACCGC GTCATGAGTG AGAAACGCAA GACTTTAGTG 
GCTTACCATG AAGCTGGCCA CGCCCTAGTC GGTGCGTTGA TGCCTGACTA CGATCCTGTA 
CAGAAAATTA GCATTATTCC CCGTGGTCGC GCGGGTGGGT TAACTTGGTT TACTCCTAGT 
GAAGATCGCA TGGAGTCGGG GTTATATTCC CGTTCCTACC TGCAAAACCA GATGGCTGTC 
GCTTTAGGCG GTCGTGTTGC TGAAGAGATC ATTTTTGGGG AAGAAGAAGT TACTACCGGG 
GCTTCTAATG ACTTACAACA GGTCGCACGA GTTGCCCGTC AGATGGTGTC CCGGTTTGGT 
ATGAGCGATC GCTTGGGACC TGTGGCCTTG GGACGGCAAA ATGGCAATGT CTTCTTAGGT 
CGGGATATTG CTTCTGATCG GGACTTTTCT GATGAAACAG CAGCCGCGAT CGATGAAGAA 
GTTCGTCAAT TAGTCGATCA AGCTTACAAG CGGGCTAAGG ATGTTTTGGT CAATAACCGT 
CACATCCTCG ATAAATTAGC TCAAATGCTG GTGGAAAAAG AAACTGTTGA TGCTGACGAA 
TTACAGGAAA TTTTGACCAG TAATGAAGTC AAAATGGCTG CCTTAGCCTA A 

 

Protein sequence

MSKNNKKWRN AGLYALLLIV VLALASAFFD QQPQSREPLT YTEFINQVEN NQITRVSLSA 
DRAEARVPNP NGGAPLVVNL PNDPDLINIL TKHNVDISVQ PQTDEGLWFR VASSLFLPIL 
LLVGLFLLLR RAQSGPGSQA MNFGKSKARV QMEPQTQVTF GDVAGIEQAK LELAEVVDFL 
KNADRFTAIG AKIPKGVLLV GPPGTGKTLL AKAVAGEAGV PFFSISGSEF VEMFVGVGAS 
RVRDLFEQAK ANAPCIVFID EIDAVGRQRG AGLGGGNDER EQTLNQLLTE MDGFEGNTGI 
IIIAATNRPD VLDAALLRPG RFDRQVVVDR PDYAGRQEIL KVHARGKTLS KDIDLDKIAR 
RTPGFTGADL SNLLNEAAIL AARRNLTEIS MDEVNDAIDR VLAGPEKKNR VMSEKRKTLV 
AYHEAGHALV GALMPDYDPV QKISIIPRGR AGGLTWFTPS EDRMESGLYS RSYLQNQMAV 
ALGGRVAEEI IFGEEEVTTG ASNDLQQVAR VARQMVSRFG MSDRLGPVAL GRQNGNVFLG 
RDIASDRDFS DETAAAIDEE VRQLVDQAYK RAKDVLVNNR HILDKLAQML VEKETVDADE 
LQEILTSNEV KMAALA