| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_0301 |
|---|
| Symbol | |
|---|
| ID | 7110545 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | - |
|---|
| Start bp | 327226 |
|---|
| End bp | 328143 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 643478576 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_002375637 |
|---|
| Protein GI | 218437308 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 0.0783167 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAGCA TGATTCCAAC TCCTCACCTA TCCAAACAAG TTATTTTAAT TACCGGCGCT
TCTGCGGGAA TAGGCGCAGC CCTCGCCGAG ACTCTAGCTA AACAGTTTAC GGGTATTCGT
TTAGTCTTAG CCGCTAGACG AAAAGAGCAA CTAGAGCAAG TGGCTCATCA ATGTCGCCAA
GCCGGTGCTG ATGTATTAGT TATTATCACC GATATGGCAT CCGAGGAACA AGTAAAAGCC
CTAGCTCAAA GAGCCGTTGA GCATTTCGGG CGCGTGGATG CTGTAGTGAA TAATGCCGGA
TATGGACAAA TGGGGCCAAT TGAATTAATC CCCCCACAAG CCGCTAAACA TCAATTTGCC
GTTAATTTTC ATAGTGTGTT TATATTAACC CAGACCTTAA TTCCCGTCAT GCGTTCCCAA
GGCGGAGGAA GAATTATTAA TGTCAGTTCT CTGGGGGGAA GAATGGCGTT TCCGGCGGGG
GGAATGTACA GTTGCTCTAA ATTTGCCCTA GAAGCCCTCA GCGATGTTAT GCGGATGGAA
TTAAAGGCAT TTAATATTTT AGTCAGTGTG GTTGAACCCG GCCCTGTCGT CACAGAATTC
TTTCAAGCTG CCTGGGATAA AATCGAAAAA ACCGTTCCTG AGCCGAAAAA AAATATTTAT
GCCCCCGCTT TAGCTAAAAT TGAAGCAATA GACCAGCAAC TGAGTTTATT AGGGTGGACT
TCCGAAAAAG TCGCTCAGGT GATTGTGCAA GCTCTCACGG CTCGCCATCC TCGTCCTCGT
TATATTGCGG CTACTGGAGG CTGGTTTTTT GTCCCCATGA TGACAAAAGT AATGCCCACT
TGGTTTACAG ATGCCTTTTG GAAATATTTC TATGGCATCG ATCAAGTCGA AAAACAATGG
AAGAAAACTA ATGGATAA
|
|---|
| Protein sequence | MLSMIPTPHL SKQVILITGA SAGIGAALAE TLAKQFTGIR LVLAARRKEQ LEQVAHQCRQ
AGADVLVIIT DMASEEQVKA LAQRAVEHFG RVDAVVNNAG YGQMGPIELI PPQAAKHQFA
VNFHSVFILT QTLIPVMRSQ GGGRIINVSS LGGRMAFPAG GMYSCSKFAL EALSDVMRME
LKAFNILVSV VEPGPVVTEF FQAAWDKIEK TVPEPKKNIY APALAKIEAI DQQLSLLGWT
SEKVAQVIVQ ALTARHPRPR YIAATGGWFF VPMMTKVMPT WFTDAFWKYF YGIDQVEKQW
KKTNG
|
|---|
| |