| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3719 |
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| Symbol | |
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| ID | 8134699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4197156 |
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| End bp | 4198418 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644867019 |
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| Product | FtsH protease regulator HflK |
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| Protein accession | YP_003019270 |
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| Protein GI | 253690080 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0503077 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGTGGA ATCAGCCCGG TAATAACGGA CAAGACCGCG ACCCGTGGGG GAGCAGCAGC
AATAATGGCG GCAACTCTGG CGGAAATAAC AATAAAGGTG GCCGAGATCA GGGGCCGCCG
GATCTGGACG ACATCTTCCG TAAACTGAGC AAAAAACTCA GCGATCTGGG TGGCGGAAAA
GGTTCTGGCT CAAGCAACAG CGGAAATTCT GGCGGCCCAG CTCTGGGTGG CCGGATCGTC
GGTATCGCTG CCGTCGCTGC GGTTGTCATT TGGGCTGCTA CGGGTTTCTA TACCATCAAA
GAAGCGGAAC GCGGTGTCGT AACGCGCTTT GGTAAATTTA GCCATTTGGT TGGGCCTGGT
CTTAACTGGA AACCGACCTT CATCGACTCT GTTCGCGCAG TGAACGTCGA GTCGGTGCGT
GAACTGGCGA CGTCGGGCGT GATGTTGACG TCAGACGAGA ACGTCGTGCG CGTTGAAATG
AACGTGCAGT ATCGTGTCAC GCAGCCAGAA CAATATCTGT TCAGCGTAAC CAATGCGGAT
GACAGCCTGC GTCAGGCCAC TGACAGTGCG CTGCGCGGCG TTATTGGTAA GTACACGATG
GACAAAATTT TGACAGAAGG CCGTACCATT GTGCGTACGG ATACCCAGCG TGTACTGGAA
GAAACCGTTC GTCCGTACAA CATGGGTGTC ACGCTGCTGG ACGTCAACTT CCAGACCGCG
CGTCCGCCGG AGGAAGTGAA AGCCGCGTTT GATGATGCGA TTGCCGCACG TGAAAACGAA
CAGCAATATA TTCGTGAAGC GGAAGCTTAC GCGAACGAAG TGCAGCCGCG TGCTAACGGT
CAGGCCCAGC GTATTCTGGA AGAGTCTCGC GCTTATAAAA CCCGTACCGT TCTGGAAGCT
CAGGGTGAAG TTGCCCGTTT CGCCAGAGTT TTACCGGAAT ATAAAGCCGC GCCGGAAATC
ACCCGCGAGC GTCTGTATAT CGAAACGATG GAACGCGTGC TGAGCCATAC CCGCAAAGTG
CTGGTCAATG ACAAGGGGGG CAACCTGATG GTGCTGCCGT TGGATCAGAT GCTGCGTGGA
CAAGGCGGTG AAAATACGCA AAGCAACAGC AATAACAGCA GCGCTAGCCC ACTGCGTCTG
CCTACTGGCA GCAGCGGTGC AGCGAACAGC AATCAGACGC GCAGCAGTAA CAATGGAAAT
ATCATGGATC AGCGCAGAGC AAATGCGCAG CGTGATGACT TCACTCGAGT AGGGAGAGAA
TAA
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| Protein sequence | MAWNQPGNNG QDRDPWGSSS NNGGNSGGNN NKGGRDQGPP DLDDIFRKLS KKLSDLGGGK
GSGSSNSGNS GGPALGGRIV GIAAVAAVVI WAATGFYTIK EAERGVVTRF GKFSHLVGPG
LNWKPTFIDS VRAVNVESVR ELATSGVMLT SDENVVRVEM NVQYRVTQPE QYLFSVTNAD
DSLRQATDSA LRGVIGKYTM DKILTEGRTI VRTDTQRVLE ETVRPYNMGV TLLDVNFQTA
RPPEEVKAAF DDAIAARENE QQYIREAEAY ANEVQPRANG QAQRILEESR AYKTRTVLEA
QGEVARFARV LPEYKAAPEI TRERLYIETM ERVLSHTRKV LVNDKGGNLM VLPLDQMLRG
QGGENTQSNS NNSSASPLRL PTGSSGAANS NQTRSSNNGN IMDQRRANAQ RDDFTRVGRE
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