Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2321 |
Symbol | tpx |
ID | 8133265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 2662363 |
End bp | 2662866 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644865602 |
Product | thiol peroxidase |
Protein accession | YP_003017889 |
Protein GI | 253688699 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2077] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACAGA ACGTACATTT TCAAGGCAAT CCTGTGCCAG TATCAGGGTC ATTCCCAGCC AAAGGAAGCA AAGCCCCGGC ATTTACCCTG GTCGCTAAAG ATTTGTCAGA TACCCCACTC AGCAACTATG CTGGCAAGCG CAAAATCCTG AACATTTTCC CAAGCATCGA TACCGGTGTT TGTGCCGCGT CCGTGCGCAA ATTCAACCAG CTGGGTTCTG AGCTGGATAA CACCGTTGTT CTGTGTATTT CTTCCGATCT GCCATTCGCT CAGTCTCGTT TTTGCGGCGC GGAAGGTCTG AACAACGTCG TTGTGCTGTC TACCCTGCGT GGCGGTGAGT TCAAAGAAAA TTACGGTGTT GCTATCGCTG ATGGCGCGCT GAAAGGCCTG ACCGCTCGCG CGGTTGTTGT ACTGGATGAA AACGACAACG TCCTGCATAG CGAGCTGGTG AACGAAATCA CCACTGAACC AGACTATGAC GCCGCACTGG CAGTTCTGAA ATAA
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Protein sequence | MSQNVHFQGN PVPVSGSFPA KGSKAPAFTL VAKDLSDTPL SNYAGKRKIL NIFPSIDTGV CAASVRKFNQ LGSELDNTVV LCISSDLPFA QSRFCGAEGL NNVVVLSTLR GGEFKENYGV AIADGALKGL TARAVVVLDE NDNVLHSELV NEITTEPDYD AALAVLK
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