| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2013 |
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| Symbol | |
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| ID | 8132957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2309270 |
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| End bp | 2310316 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644865303 |
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| Product | putative periplasmic protease |
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| Protein accession | YP_003017590 |
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| Protein GI | 253688400 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0439516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAATTAC TTTCTCTGTA CGGTTTATTC CTGGCTAAGG TACTCACTAT CGTGGTGGCT
ATTGGTGCGT TAGTCGTTCT GGCATTCGGG ATGACGCAGC GTAAGCGCCA GCATAAAGGT
GAGTTGCAGG TCACGAATCT GGGCGAGCAA TATCAGGAAA TGCAGCGCGA AATGCAGACT
GCCTGTATGA GCGACACCGA ACGTAAGCTG CTATCGAAAC AAGAAAAGAA GAAAGACAAA
GAAACTGCGA AGCAAGATAA ACAGCGCGCC AAACGTGGTG AAGAGAAAAG TGTCAAACCG
TGCCTGTACG TTCTCGATTT CAACGGCAGT ATGGATGCGG GCGAAGTCAG TTCACTACGT
GAAGAGATTT CCGCCGTACT GGCTGTCGCG AAGCCGCAGG ATGAAGTGCT GTTGCGTCTC
GAAAGCCCCG GTGGTGTGGT GCACGGCTAT GGGCTGGCCG CCTCACAATT ACAACGTTTA
CGTCAGGGCG GTGTGCGTTT GACCGTCGCC GTGGATAAAG TGGCTGCCAG CGGTGGCTAT
ATGATGGCCT GCGTGGCTGA CCGTATTGTA GCGGCTCCTT TTGCGATTGT GGGTTCTATT
GGTGTCGTGG CACAAATTCC CAATTTCCAC CGTTTGCTGA AAAACAAAGA CATTGATGTT
GAGCTGCACA CTGCCGGTGA ATTCAAGCGT ACGTTGACGC TGTTTGGTGA GAATACCGAA
CAAGGCCGTG AGAAATTTCG CGAAGATCTG AATGTCACGC ATACGCTGTT TAAGGATTTT
GTGCAGCAGA TGCGTCCTTC GTTGGATATT GATTCGGTTG CGACAGGAGA GCACTGGTTT
GGCACGCAGG CGAAAGATCT GGGATTGATT GACGCCATTG GCACCAGTGA CGATCTGCTG
ATTGCTGAAA TGACCAGCCA TGAAGTATTA AGCGTGCGCT ATACGCGCCG TAAACGCCTG
TTGGATCGCC TGACGGGCAG CGCTGGGGAT ACCGCAGAAC GACTGATGCT GCGCTGGTGG
CAACGTGGTT CAAAGCCCCT GTTGTAA
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| Protein sequence | MELLSLYGLF LAKVLTIVVA IGALVVLAFG MTQRKRQHKG ELQVTNLGEQ YQEMQREMQT
ACMSDTERKL LSKQEKKKDK ETAKQDKQRA KRGEEKSVKP CLYVLDFNGS MDAGEVSSLR
EEISAVLAVA KPQDEVLLRL ESPGGVVHGY GLAASQLQRL RQGGVRLTVA VDKVAASGGY
MMACVADRIV AAPFAIVGSI GVVAQIPNFH RLLKNKDIDV ELHTAGEFKR TLTLFGENTE
QGREKFREDL NVTHTLFKDF VQQMRPSLDI DSVATGEHWF GTQAKDLGLI DAIGTSDDLL
IAEMTSHEVL SVRYTRRKRL LDRLTGSAGD TAERLMLRWW QRGSKPLL
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