| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0872 |
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| Symbol | |
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| ID | 8131798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1013944 |
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| End bp | 1016097 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644864153 |
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| Product | ornithine decarboxylase |
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| Protein accession | YP_003016458 |
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| Protein GI | 253687268 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.507937 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAGT TAAAAATTGC GGCGAATGCA GCGGTTGCCA CCCGTTTAAT CACAACGCGC
GAGATTGTCG CGTTGAGTCA GACCGACTTC ACGGATGTGG CGGCGGTCGT GGTTTCTATT
GAGGAAGCCC GTAGCGGCAT TCTGTCGATA TTGCAGCACA CTGGCTTTAG TATCCCGGCG
TTTGTCGAAG AGCCTGACGA AGATAAAGAG CTGGATGTTC TGCCTGCGGG CAGCGAATGG
CTGGTTCTTG ATGACGACGG CGAGCACGCT AACGTGCTGG AGCGAGCGGC GAAAGCCTAT
CAGGATACCC TGTTGCCACC GTTTTTCGAT ACGCTGACCA AATACGTCAA CATGAAAAAC
ACGACGTTTG CCTGTCCGGG GCATCAGGGC GGCCAGTTCT TCCGCAAGCA CCCGGCGGGG
CGTCAGTTTT TTGAGTTTTA CGGTGAGAAC GTGTTTCGTT CGGACATCTG TAACGCTGAC
GTCAAGCTAG GTGATTTGTT GATTCACGAA GGGGCGGCGA AGAAGGCGCA GAAGCATGCT
GCGCGTGTGT TTAACGCGGA TAAAACCTAT TTCGTGTTGA ACGGCACGTC CTCTGCGAAC
AAAGTGGTGA CGAACGCGCT GCTGGCGCGT GGCGATCTGG TGCTGTTTGA CCGCAACAAC
CATAAATCCA ACCATCACGG CGCGCTGATT CAGGCGGGCG CGACGCCAGT CTATCTGGAA
ACCGTGCGCA ACCCGTTCGG TTTTATCGGC GGTGTGGATG CGCATTGTTT TGATGAAGCC
TATCTGCGCA AGCTGATCGC GGAAGTCGCA CCGGAACGCG CCAACGAGCC GCGTCCGTTC
CGTCTGGCCG TCATCCAGCT CGGCACCTAT GACGGCACCA TTTATAACGC GCGTCAGGTT
GTCGATAGCA TCGGGCACCT GTGCGACTAC ATTCTGTTTG ACTCCGCCTG GGTCGGCTAT
GAGCAGTTTA TCCCGATGAT GGAGCAGTGC TCGCCGCTGT TGCTGGATCT GAATGAGAAC
GATCCGGGCA TCTTTGTCAC TCAGTCGGTG CATAAGCAGC AGGCGGGCTT CTCCCAGACC
TCGCAGATCC ACAAGAAAGA TACGCACATC AAAGGCCAGC GCCGTTTCTG CAACCATAAA
CAGCTGAATA ACGCCTTTAT GCTGCATGCC TCAACCAGTC CGTTTTATCC GCTGTTTGCG
GCATTGGATA TCAACGCCAA AATGCACGAA GGGGCAAGCG GGCGTCGGAT GTGGATGGAC
TGCGTGAAGT TGGGCATTGA GGCGCGTAAG CAGCTGCTGA CGCGCTGTTC GCTCATCAAA
CCGTTCGTGC CTGTGACGGT GGGCGGCGCG CTCTGGCAGG ATCTCGATAC GGAGACGATC
GCGCAGGACG TGCGTTTCTT CAACTTTGAG CCGGGCGAGA AATGGCATGC GTTCGAAGGG
TACGCCGAGG ATCAGTACTT TATCGATCCC TGCAAATTAC TGCTGACCAC GCCGGGTATT
GATGCGATTA GCGGCGATTA TACCGAATTT GGTATTCCGG CGACGATCCT GGCTAACTAC
CTGCGTGAGC ACGGCATTAT CCCGGAAAAA TGCGACATGA ACTCGATCCT GTTCCTGCTA
ACGCCAGCGG AAGACGCTGC AAAAATGCAG GAACTGGTGA ATGCGCTGGT GCACTTCGAA
ACGCTGATTG CCCGCGATGC GCCGTTGAGT GAAGTGCTGC CTAGCCTGTA TCAGAAATAC
AAAGAGCGCT ACCGCGGTTA TCGGCTGCGC CGGCTGTGTC AGGAAATGCA TGACTTTTAC
GCTCAGCACA ACGTGAAAGA TCTGCAAAAA GCGATGTTCC GCAAAACCGA GTTTCCGTCC
GTGGTGATGT TGCCGCAGGA TGCTAACAGA GAGTTTGTGC GCGGGAATAT CGAACTGGTT
CCCATTGCTG AAGCAGAAGG GCGTATCGCG GCAGAAGGCG CATTGCCATA TCCGCCGGGC
GTGCTGTGCG TCGTGCCGGG GGAAACCTGG GGCGGGGCGG TACAGCGCTA TTTTCTGGCG
TTGGAAGCGG GCATTAACCT GCTGCCGGGC TTCTCCCCGG AATTGCAGGG CGTCTATAGC
GTCGCGGAAG AAGATGGCAG CAAACGTCTG TATGGTTACG TAGTAGAACA GTAA
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| Protein sequence | MKQLKIAANA AVATRLITTR EIVALSQTDF TDVAAVVVSI EEARSGILSI LQHTGFSIPA
FVEEPDEDKE LDVLPAGSEW LVLDDDGEHA NVLERAAKAY QDTLLPPFFD TLTKYVNMKN
TTFACPGHQG GQFFRKHPAG RQFFEFYGEN VFRSDICNAD VKLGDLLIHE GAAKKAQKHA
ARVFNADKTY FVLNGTSSAN KVVTNALLAR GDLVLFDRNN HKSNHHGALI QAGATPVYLE
TVRNPFGFIG GVDAHCFDEA YLRKLIAEVA PERANEPRPF RLAVIQLGTY DGTIYNARQV
VDSIGHLCDY ILFDSAWVGY EQFIPMMEQC SPLLLDLNEN DPGIFVTQSV HKQQAGFSQT
SQIHKKDTHI KGQRRFCNHK QLNNAFMLHA STSPFYPLFA ALDINAKMHE GASGRRMWMD
CVKLGIEARK QLLTRCSLIK PFVPVTVGGA LWQDLDTETI AQDVRFFNFE PGEKWHAFEG
YAEDQYFIDP CKLLLTTPGI DAISGDYTEF GIPATILANY LREHGIIPEK CDMNSILFLL
TPAEDAAKMQ ELVNALVHFE TLIARDAPLS EVLPSLYQKY KERYRGYRLR RLCQEMHDFY
AQHNVKDLQK AMFRKTEFPS VVMLPQDANR EFVRGNIELV PIAEAEGRIA AEGALPYPPG
VLCVVPGETW GGAVQRYFLA LEAGINLLPG FSPELQGVYS VAEEDGSKRL YGYVVEQ
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