| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0279 |
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| Symbol | |
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| ID | 8131192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 326461 |
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| End bp | 327552 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644863559 |
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| Product | D-arabinose 5-phosphate isomerase |
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| Protein accession | YP_003015874 |
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| Protein GI | 253686684 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation |
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| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.954706 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACAGT TTGAACAAGA TGCTCATCTA AAACAGCAGT CTGACCGTGC ACTATCCGAT
CATGCAACAC AAGCCGATCA CGCACCACAA GCCGATCATA CGCGACAAAA GTCTCATGAA
CTGCCAGCCG ATTTCGACTT CCAGCAGGCG GGTAAGCAGG TAATAAGCAT CGAACGCGAT
GGGCTTGCGC AATTAGATCA GTACATTGAT GATAATTTTA CCCTCGCCTG TAAAAAGATA
TTCGATTGCC AAGGCAAAGT TGTGGTGATG GGAATGGGCA AATCCGGCCA CATTGGCTGC
AAGATGGCCG CGACTTTCGC CAGTACCGGT ACGCCTGCTT TTTTTGTTCA CCCAGGCGAA
GCCAGCCACG GCGACCTCGG TATGGTAACG CCGCACGATA TCGTGATCGC CATTTCCAAC
TCTGGCGAGT CCCATGAGAT TCTGTCGCTG ATTCCCGTCC TGAAACGTCA GAAAGTGTTC
CTGATCTGCA TGACCAGCGC GCCAGAAAGT ACAATGGGTA AAGCGGCGGA TATTCACCTG
TGCGTGCACG TCCCGCAGGA AGCCTGCCCG CTCGGTCTGG CTCCCACTTC CAGCACGACC
GCGACGTTGG TCATGGGAGA TGCGCTGGCC GTGGCGTTGC TACAGGCGCG CGGCTTTACC
GCCGAAGATT TTGCCCTTTC TCACCCTGGT GGCGCACTCG GCCGCAAACT TTTATTGCGC
GTCAGCGATA TCATGCACTC AGGCGACGAG ATTCCGCATG TTCCACACGA TGCTTCACTC
CGTGATGCAC TGGTGGAAAT TACGCGCAAA AATCTGGGTA TGACGGTAAT CTGCGAGGCG
GATATGAAAA TTCAGGGCAT CTTTACCGAT GGTGACCTGC GCCGCATCTT CGACATGAAT
ATTGACTTGA ACAGCGCGCG CATTGCTGAT GTGATGACCG CGGGCGGTAT CCGGGTCGCA
CCGCAAACGC TGGCGGTGGA TGCACTTAAC CTGATGCAGT CACGCCACAT CACCTCAGTG
CTGGTGGCAG AAAACGATCG TCTGGTCGGG ATCGTCCATA TGCACGATAT GCTGCGGGCT
GGCGTGGTTT AA
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| Protein sequence | MSQFEQDAHL KQQSDRALSD HATQADHAPQ ADHTRQKSHE LPADFDFQQA GKQVISIERD
GLAQLDQYID DNFTLACKKI FDCQGKVVVM GMGKSGHIGC KMAATFASTG TPAFFVHPGE
ASHGDLGMVT PHDIVIAISN SGESHEILSL IPVLKRQKVF LICMTSAPES TMGKAADIHL
CVHVPQEACP LGLAPTSSTT ATLVMGDALA VALLQARGFT AEDFALSHPG GALGRKLLLR
VSDIMHSGDE IPHVPHDASL RDALVEITRK NLGMTVICEA DMKIQGIFTD GDLRRIFDMN
IDLNSARIAD VMTAGGIRVA PQTLAVDALN LMQSRHITSV LVAENDRLVG IVHMHDMLRA
GVV
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