Gene PA14_53020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_53020 
SymbolpbpG 
ID4382848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4700957 
End bp4701889 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content66% 
IMG OID639326848 
ProductD-alanyl-D-alanine endopeptidase 
Protein accessionYP_792407 
Protein GI116048793 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGAAACC GTCTCCTGTC ACTGGTCACC CTGTTCCTGT CCCTCAGCGT TGCCACCGCG 
GTATCCGCCT CCCCGCCGCC CAAGGCCGGG CTGCCGCTGC AACAGGAGCT GGCGTCGGGC
AGCGCGCTGG TTACCGACCA GAACACCGGC AAGGTGCTCT ACTCGCGCAA CCCCGACCTG
GTGGTGCCGA TCGCCTCGAT CACCAAGCTG ATGACCGCCA TGGTCGTGCT CGACTCGAAA
CTGCCGCTGG ACGAGGTACT GCCGATCGCC ATCAGCGAGA CCAGCGAAAT GCGCGGGGTG
TTTTCCCGAG TGCGGGTCGG CAGCCAGATC AGCCGCCGGG ACATGCTCCT GCTCGCCCTG
ATGTCCTCGG AGAACCGCGC CGCCGCCAGC CTCGCGCAGA ACTATCCGGG CGGCAAGAAC
GCCTTCGTCA AGGCGATGAA CGCCAAGGCC CACGCCCTCG GAATGAAGAA CACCCGCTAC
GTCGAGCCGA CCGGGCTGTC GCTGCACAAC GTCTCCACCG CTCGCGACCT CACCCGCCTG
CTGGTGGCCA GCCGGCAATA CCCGCTGCTC AGCCAGTGGA GCACCACTCC GGAGAAGACC
GTGGCCTTCC GCCACCCCAA CTACACCCTG GGCTTCCGCA ATACCAACCA CCTGATCAAC
AACAAGACCT GGAACATCCA GTTGACCAAG ACCGGCTTCA CCAACGAAGC AGGTCACTGC
CTGGTGATGC GCACCACGAT CAACCGCAGC CCGGTCAATC TGGTGGTGCT GGACGCCTTC
GGCAAGTACA CCCACTTCGC CGACGCCACC CGCCTGCGAC GCTGGCTGGA AACCGGCCAG
GTCACTGCGA TCCCGGCCGC GGCCAAGGCC TATCGCCTGC AACGCGACCG CGAGCGCGGC
CTCGGCCAGC CGGTGGCCCA GGCCGTACGC TGA
 
Protein sequence
MRNRLLSLVT LFLSLSVATA VSASPPPKAG LPLQQELASG SALVTDQNTG KVLYSRNPDL 
VVPIASITKL MTAMVVLDSK LPLDEVLPIA ISETSEMRGV FSRVRVGSQI SRRDMLLLAL
MSSENRAAAS LAQNYPGGKN AFVKAMNAKA HALGMKNTRY VEPTGLSLHN VSTARDLTRL
LVASRQYPLL SQWSTTPEKT VAFRHPNYTL GFRNTNHLIN NKTWNIQLTK TGFTNEAGHC
LVMRTTINRS PVNLVVLDAF GKYTHFADAT RLRRWLETGQ VTAIPAAAKA YRLQRDRERG
LGQPVAQAVR