Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_52580 |
Symbol | lysC |
ID | 4383135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4660763 |
End bp | 4662001 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639326813 |
Product | aspartate kinase |
Protein accession | YP_792372 |
Protein GI | 116048828 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0527] Aspartokinases |
TIGRFAM ID | [TIGR00656] aspartate kinase, monofunctional class [TIGR00657] aspartate kinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTTTGA TCGTACAGAA GTTTGGAGGG ACCTCCGTCG GCACCGTCGA GCGTATCGAG CAGGTGGCCG AGAAGGTGAA GAAATTCCGC GAAGCGGGCG ATGACGTCGT CGTGGTGGTA TCCGCCATGA GCGGCGAGAC CAACCGTCTG ATCGGCCTGG CCAACCAGAT CATGGAGCAG CCGGTTCCGC GCGAACTGGA CGTCATGGTC TCGACCGGAG AGCAGGTGAC CATCGCCCTG CTCAGCATGG CTCTGATCAA GCGCGGCGTG CCGGCGGTCT CCTATACCGG CAACCAGGTG CGTATCCTCA CCGACAGCGC ACACACCAAG GCGCGCATCC TGCACATCGA CGACACCCAC ATCCGCGCCG ACCTCAAGGC CGGCAGGGTA GTGGTGGTCG CCGGTTTCCA GGGCGTCGAC GGCAACGGCA ACATCACCAC GCTGGGCCGC GGCGGTTCCG ATACCACCGG GGTGGCCCTG GCGGCGGCGT TGAAGGCCGA CGAATGCCAG ATCTACACCG ACGTCGACGG CGTCTACACC ACCGATCCGC GCGTAGTGCC GCAGGCCCGC CGGCTGGACA AGATCACCTT CGAGGAAATG CTGGAAATGG CCAGCCTCGG TTCCAAGGTG CTGCAGATCC GGGCGGTCGA GTTCGCCGGC AAGTACAACG TTCCGCTGCG CGTGCTGCAC AGCTTCCAGG AGGGTCCGGG CACCCTCATT ACTATCGATG ATGAAGAGGA ATCCATGGAA CAGCCGATCA TCTCCGGCAT CGCCTTCAAC CGCGACGAAG CCAAGCTGAC CATCCGTGGC GTACCCGATA CCCCCGGCGT GGCCTTCAAG ATCCTCGGGC CGATCAGTGC CGCCAATGTG GAAGTCGACA TGATCGTGCA GAACGTGGCG CACGATAACA CCACCGACTT CACCTTCACG GTGCATCGCA ACGATTACCT GAACGCCCTG GAAATTCTCA AGCAGACCGC CGCCAACATC GGCGCGCGCG AAGCCATCGG CGACACCAAC ATCGCCAAGG TTTCCATCGT CGGCGTCGGC ATGCGTTCGC ACGCCGGCGT GGCCAGCCGC ATGTTCGAGG CGCTGGCCAA GGAAAGCATC AACATCCAGA TGATCTCCAC CTCGGAAATC AAGGTTTCCG TGGTGATCGA AGAGAAGTAC CTGGAACTGG CGGTACGTGC CCTGCACACG GCGTTCGAGC TCGACGCGCC GGCGCGACAG GGTGAGTGA
|
Protein sequence | MALIVQKFGG TSVGTVERIE QVAEKVKKFR EAGDDVVVVV SAMSGETNRL IGLANQIMEQ PVPRELDVMV STGEQVTIAL LSMALIKRGV PAVSYTGNQV RILTDSAHTK ARILHIDDTH IRADLKAGRV VVVAGFQGVD GNGNITTLGR GGSDTTGVAL AAALKADECQ IYTDVDGVYT TDPRVVPQAR RLDKITFEEM LEMASLGSKV LQIRAVEFAG KYNVPLRVLH SFQEGPGTLI TIDDEEESME QPIISGIAFN RDEAKLTIRG VPDTPGVAFK ILGPISAANV EVDMIVQNVA HDNTTDFTFT VHRNDYLNAL EILKQTAANI GAREAIGDTN IAKVSIVGVG MRSHAGVASR MFEALAKESI NIQMISTSEI KVSVVIEEKY LELAVRALHT AFELDAPARQ GE
|
| |