Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_41230 |
Symbol | clpX |
ID | 4383084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 3678582 |
End bp | 3679862 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639325873 |
Product | ATP-dependent protease ATP-binding subunit ClpX |
Protein accession | YP_791441 |
Protein GI | 116049752 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.289248 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGATA CCCGCAACGG CGAGGACAAC GGCAAGCTGC TGTATTGCTC CTTCTGCGGC AAGAGCCAGC ACGAAGTGCG CAAGTTGATT GCCGGCCCCT CGGTCTTTAT CTGCGACGAG TGTGTCGACC TGTGCAATGA CATCATCCGC GAGGAGGTGC AGGAAGCGCA GGCGGAAAGT AGTGGGCACA AACTTCCGGC GCCGAAAGAG ATCCGCACCA TCCTCGATCA GTACGTGATC GGGCAGGAGC GGGCCAAGAA GGTTCTGGCG GTAGCGGTAT ACAACCACTA CAAGCGCCTC AACCAGCGTG ACAAGAAGGA CGATATCGAG CTCGGCAAGA GCAACATTCT GATGATCGGC CCAACCGGCT CGGGCAAGAC CCTGCTGGCC GAGACCCTCG CACGTCTGCT GAACGTGCCG TTCACCATCG CCGATGCGAC CACGCTGACG GAAGCGGGCT ACGTGGGCGA GGATGTCGAG AACATCATCC AGAAACTCTT GCAGAAGTGC GATTACGATG TGGAGAAGGC CCAGATGGGC ATCGTCTACA TCGACGAGAT CGACAAGATT TCCCGGAAAT CGGACAACCC CTCCATCACT CGCGACGTTT CCGGCGAGGG TGTGCAGCAG GCCCTGCTGA AGCTCATCGA GGGCACCGTT GCCTCGGTAC CGCCGCAGGG CGGTCGTAAG CACCCGCAGC AGGAGTTCCT GCAGGTCGAT ACGCGCAACA TCCTGTTCAT CTGCGGCGGC GCTTTCGCCG GTCTGGAGCG GGTCATCCAG AACCGTTCCG CGCGCGGCGG CATCGGTTTC AATGCCGAAG TGCGCAGTCA GGAGATGGGC AAGAAGGTCG GCGAGGCGTT CAAGGAAGTC GAGCCGGAAG ATCTCGTCAA GTTCGGTCTT ATCCCCGAGT TTGTAGGGCG TTTGCCGGTG ATCGCGACTC TTGATGAGCT CGACGAGGCT GCGCTCATGC AGATCCTGAC CGAGCCGAAG AACGCTCTCA CCAAGCAGTA CGCCAAGCTG TTCGAGATGG AAGGCGTCGA TCTCGAATTC CGTCCGGACG CACTCAAGGC GGTTGCCCGC AAGGCGCTCG AACGCAAGAC CGGTGCACGT GGCTTGCGTT CAATTCTCGA AGGTATCCTT CTCGATACCA TGTACGAGAT TCCCTCCCAG CAGGATGTCA GCAAGGTGGT CATCGATGAG AGTGTCATCG ATGGCTCGTC GCAACCCCTG ATGATCTACG AGAACAGCGA AAAGCCAGCC AAGGCTGCGC CTGAGGCATG A
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Protein sequence | MTDTRNGEDN GKLLYCSFCG KSQHEVRKLI AGPSVFICDE CVDLCNDIIR EEVQEAQAES SGHKLPAPKE IRTILDQYVI GQERAKKVLA VAVYNHYKRL NQRDKKDDIE LGKSNILMIG PTGSGKTLLA ETLARLLNVP FTIADATTLT EAGYVGEDVE NIIQKLLQKC DYDVEKAQMG IVYIDEIDKI SRKSDNPSIT RDVSGEGVQQ ALLKLIEGTV ASVPPQGGRK HPQQEFLQVD TRNILFICGG AFAGLERVIQ NRSARGGIGF NAEVRSQEMG KKVGEAFKEV EPEDLVKFGL IPEFVGRLPV IATLDELDEA ALMQILTEPK NALTKQYAKL FEMEGVDLEF RPDALKAVAR KALERKTGAR GLRSILEGIL LDTMYEIPSQ QDVSKVVIDE SVIDGSSQPL MIYENSEKPA KAAPEA
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