| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_40470 |
|---|
| Symbol | |
|---|
| ID | 4385888 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 3615195 |
|---|
| End bp | 3616649 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639325814 |
|---|
| Product | TrkH family potassium uptake protein |
|---|
| Protein accession | YP_791383 |
|---|
| Protein GI | 116049810 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
|---|
| TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTTT CCCTGCTCCG CCTGGTGGGA TTCATCCTCG GGCTTTTCCT GGTCACCCTG
GCGGCCAGCA TGCTGATCCC GATGCTGACG CTGGCGCTCT TCCAGCGCTA CGACGATTTC
GACGCCTTCC TCTGGTCGAG CCTGCTCACC GCGGCTGCCG GCCTCGCGCT GGTCTTGCCG
GGACGGCCGG CTCACGTGCA TTTTCGTGCC CGGCACATGT ATTTCCTGAC CACCGCCAGT
TGGGTGGTGG TCTGCGCCTT CGCCGCGCTG CCGATGGTGA TGGCTCGGCA CATCAGCTAC
ACCGATGCGT TCTTCGAGAC CATGTCGGGC ATCACCACCA CCGGCTCCAC CGTGTTCAGC
GGGTTGGACC AGATGTCGCC GGGCATCCTC ATCTGGCGCT CGTTGTTGCA CTGGCTCGGC
GGCATCGGTT TCATCGGCAT GGCGGTGGCG ATCCTGCCGC TGCTGCGTGT CGGCGGCATG
CGCCTGTTCC AGACCGAATC CTCCGACTGG GGCGAGAAGG TGATGCCACG CTCGCACATG
GCGGCCAAGT ACATCCTCGG CGTCTACGTC GCGCTTACGC TGCTGGGCGT GCTGTGCTTC
TGGTGGGCGG GCATGACCCC CTTCGAGGCG TTCAACCATT CGATGGCCGC CATCTCCACG
GGCGGCTTCT CCACCTCCGA CGCTTCCCTC GCGCACTGGC CGCAACCGGC GGTGCACTGG
GTCGCCGTGT TGTTCATGAT CCTCGGCAGC CTGCCGTTCA CCCTCTATGT CGCGACCCTG
CGCGGCCATC GCCTGGCCTT GCTCAAGGAC CACCAGGTGC ATGGCTTCAT CGGCTTCCTG
GCGGTGACCT GGCTGGTTTT CGCCTTCTGG CTCTGGCTGA ATTCCGATTA CGGCTGGTGG
GATGCGCTGC GCCTGGTGGC GGTCAATGTG ACGTCGGTGG TGACCACCAC CGGTTTCGCC
CTGACCGACT ACACCACCTG GGGAACCTTC GCGGTCATGC TGTTCTTCTA CCTCACCTTC
GTCGGCGGTT GCTCGGGCTC CACCGCCGGC GGGTTGAAGA TCTTCCGCTT CCAGGTGGCC
TTCGTGTTGC TCAGGGCCAA CCTGCAGAAC CTCGTGCATC CGCGGGCGAC CATCCGGCAA
AGCTACAACG GCCATCCGCT GGACGAGGAA ATCGTCCGCT CGCTGATCAC CTTTTCCTTC
TTCTTCACCA TCACCATCGG CGTGATCGCA CTGGGGTTGA CCATGCTCGG CCTCGACTGG
GTCTCCGCGT TCACCGGTGC CGCGACCGCC GTGTGCAACG TCGGGCCCGG GCTCGGGCCG
ATTATCGGAC CGGCGGGAAA CTTTTCCAGC CTGCCGGACA TGGCCAAGTG GCTGCTGACC
CTCGGCATGC TGCTTGGTCG GCTAGAGATT CTCACCGTAC TGGTGCTGTG CACCCGCGCG
TTCTGGCGCT TCTGA
|
|---|
| Protein sequence | MSFSLLRLVG FILGLFLVTL AASMLIPMLT LALFQRYDDF DAFLWSSLLT AAAGLALVLP
GRPAHVHFRA RHMYFLTTAS WVVVCAFAAL PMVMARHISY TDAFFETMSG ITTTGSTVFS
GLDQMSPGIL IWRSLLHWLG GIGFIGMAVA ILPLLRVGGM RLFQTESSDW GEKVMPRSHM
AAKYILGVYV ALTLLGVLCF WWAGMTPFEA FNHSMAAIST GGFSTSDASL AHWPQPAVHW
VAVLFMILGS LPFTLYVATL RGHRLALLKD HQVHGFIGFL AVTWLVFAFW LWLNSDYGWW
DALRLVAVNV TSVVTTTGFA LTDYTTWGTF AVMLFFYLTF VGGCSGSTAG GLKIFRFQVA
FVLLRANLQN LVHPRATIRQ SYNGHPLDEE IVRSLITFSF FFTITIGVIA LGLTMLGLDW
VSAFTGAATA VCNVGPGLGP IIGPAGNFSS LPDMAKWLLT LGMLLGRLEI LTVLVLCTRA
FWRF
|
|---|
| |