| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_27730 |
|---|
| Symbol | fadE |
|---|
| ID | 4380838 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 2403705 |
|---|
| End bp | 2406152 |
|---|
| Gene Length | 2448 bp |
|---|
| Protein Length | 815 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639324790 |
|---|
| Product | acyl-CoA dehydrogenase |
|---|
| Protein accession | YP_790364 |
|---|
| Protein GI | 116050814 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.0291961 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGTTGC TCTGGTTAGT CGTACTGGTA CTCGGTGTCG CTTACCTCGC CCATCGGCGT
ACCCCACCCG CTCCCGCGCT CGGCATCAGC GCCGCCTACC TGATCCTGAT GGGCGTGTTC
AGCCACGCGC CCGGCTGGCT GCTGCTGGTC TTCTGGCTGC TCTGGCTGGC GGTGGCGCTT
CCCCTCGCCC TGCCCGACCT GCGCCGGCGC GTGCTCAGCG GTCCGCTGTT CGCCTGGTTC
CAGAAAGTCC TGCCGCCGAT GTCCGACACC GAGCGCGAGG CCATCGAGGC GGGCACCGTG
TGGTGGGATG GCGAATTGTT CAGCGGCCGC CCGGACTGGC AGAAACTGCT CGACTACCCC
AAGGCGCAAC TCACCGAAGA AGAGCAGGCC TTCGTCGACG GCCCGACCGA AGAACTCTGC
GCCATGGTCA GCGACTGGGA CATCGGCCAG CGCATGGACC TGCCGGAAGA AGCCTGGGCC
TTCATCAAGC AGCACGGCTT CTTCGGCCTG ATCATTCCCA AGGAGTACGG CGGCAAGGGC
TTCTCCGCCT TCGCCCACTC ACAGGTGGTG ATGAAGCTCG CCACCCGCAG CGGCGACCTG
GCCTCGACGG TGATGGTGCC GAACTCCCTC GGCCCGGCCG AGCTGCTGCT CCACTACGGC
ACCGACGAGC AGCGCCAGCG CTACCTGCCG AGCCTGGCCA AGGGCGACGA CATCCCCTGC
TTCGCCCTCA CCGGCCCCTA CGCGGGCTCC GATGCCGGCG GCATGACCGA CGTCGGCATC
GTCTGCAAGG GCGAATGGGA AGGTCGCGAG GTACTCGGCC TGCGCCTGAC CTGGGAAAAG
CGCTACATCA CCCTCGGCCC GGTGGCCACC CTCCTCGGCC TGGCCTTCAA GTGCCACGAC
CCGGACCATT TGCTGGGCGA CGAGGAGGAC CTGGGCATCA CCCTGGCGCT GATTCCCACC
GACACCCCCG GGGTCGAGAT CGGCCGCCGC CACGTGCCGC TGGGCGCCGC CTTCATGAAC
GGTCCGAACT CCGGCAAGGA CGTGTTCGTG CCGCTGGAGT ACATCATCGG CGGGCAGGAA
ATGATCGGCA AAGGCTGGAT GATGCTGATG AACTGCCTGT CGGTCGGACG CTCCATCTCG
CTGCCGGCGG TGGGCACCAG CGCCGGCAAG GCCAGCAGCT ACGTCAGCGG TCGCTACGCC
CAGGTCCGCG AGCAGTTCAA CGTGCCGATC GCCGCCTTCG AAGGCATCCA GGAGGCGCTC
GCCCGCATCG GCGGCAACGC CTGGCTGATG GACAGCGCGC GAATCCTCAC CGCCAACGCG
GTGGACCTCG GCGAGAAGCC CTCGGTGCTT TCGGCGATCC TCAAGTACCA CCTCACCGAG
CGCGGCCGCG AGTGCATCGC CCATGCCATG GACATCCATG GCGGCAAGGG CATCATCATG
GGCCCGAACA ACTACCTGGG TCGTTCCTGG CAGGGCGCGC CGATCTTCAT CACGGTGGAA
GGCGCGAACA TCCTCTCGCG CAACCTGATG ATCTTCGGCC AGGGCGCGAT CCGTTGCCAT
CCGTACGTAC TCAAGGAAAT GGAACTGGCC CAGCGCGAGG ACAAGGACCA GGCCGCCCGC
GAGTTCGACG CGCTGCTGGT GAAGCACATC GGCTTCGCCG TCGGCAACGC CGCCAGCAGC
TTCCTCCTCA GTCTCAGCTG CGGCCACCTC GGCAACGCGC CCGGCGACCG CATCAGCCGT
CCCTACTTCC GCGCGCTGAA CCGCCTGGCG GCGTCCTTCG CCCTGCTCGC CGACTTCAGC
ATGATGCTGC TGGGCGGCGA ACTGAAGCGC AAGGAACGCC TCTCCGCGCG TCTCGGCGAT
GTCCTCAGTT ATCTCTACCT GGGCTCGGCG GCGCTCAAGC GCTACCACGA CCTGGGCAAC
CCGGACTACC TGCATCCGCT GCTGCGCTGG GCCATGGAGG AAAACCTCGG CAAGGCCGAG
GCGGCGCTGG AGGACCTGCT GAACAACTTC CCCAGCCGCT TCTTCGGCTG CGCGCTGAAG
GTCCTGGTAC TGCCGTTCGG CCGCCGGCAC AAAGGGCCGG GCGACGAACT GGACGCCGAG
ATCGCGGAAA TCCTCGGCCG TCCGGACGAC GACCCGGCGT TGCAGGCGAT CCTCGCTGGC
GCGTTCCTGC CGAAGGACCC GCAGGACCCG GTCGGTGCCC TCGCCCACGC CTTCGACGCG
GTACGCGAAA GCGCCGCGCT GGAGAAAACC CTGCACAAGG CGATCAAGGA AGGCAGGGTC
CAGCCGCAAG CGGGGCAGAA CCCGATCGAT GCCGGCGCCG CCGCCGGCGT GCTGAGCGCC
GAGCAGGCGC AGGCCCTGCA CCAGGCCGAA GCGGCACGGC GCAAGGTGAT CGACGTCGAC
GACTTCGCCA AGGAGGAACT GCAACTGGCC GACGGCAGGA TCCGCTGA
|
|---|
| Protein sequence | MLLLWLVVLV LGVAYLAHRR TPPAPALGIS AAYLILMGVF SHAPGWLLLV FWLLWLAVAL
PLALPDLRRR VLSGPLFAWF QKVLPPMSDT EREAIEAGTV WWDGELFSGR PDWQKLLDYP
KAQLTEEEQA FVDGPTEELC AMVSDWDIGQ RMDLPEEAWA FIKQHGFFGL IIPKEYGGKG
FSAFAHSQVV MKLATRSGDL ASTVMVPNSL GPAELLLHYG TDEQRQRYLP SLAKGDDIPC
FALTGPYAGS DAGGMTDVGI VCKGEWEGRE VLGLRLTWEK RYITLGPVAT LLGLAFKCHD
PDHLLGDEED LGITLALIPT DTPGVEIGRR HVPLGAAFMN GPNSGKDVFV PLEYIIGGQE
MIGKGWMMLM NCLSVGRSIS LPAVGTSAGK ASSYVSGRYA QVREQFNVPI AAFEGIQEAL
ARIGGNAWLM DSARILTANA VDLGEKPSVL SAILKYHLTE RGRECIAHAM DIHGGKGIIM
GPNNYLGRSW QGAPIFITVE GANILSRNLM IFGQGAIRCH PYVLKEMELA QREDKDQAAR
EFDALLVKHI GFAVGNAASS FLLSLSCGHL GNAPGDRISR PYFRALNRLA ASFALLADFS
MMLLGGELKR KERLSARLGD VLSYLYLGSA ALKRYHDLGN PDYLHPLLRW AMEENLGKAE
AALEDLLNNF PSRFFGCALK VLVLPFGRRH KGPGDELDAE IAEILGRPDD DPALQAILAG
AFLPKDPQDP VGALAHAFDA VRESAALEKT LHKAIKEGRV QPQAGQNPID AGAAAGVLSA
EQAQALHQAE AARRKVIDVD DFAKEELQLA DGRIR
|
|---|
| |