Gene PA14_20110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_20110 
Symbol 
ID4381364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1733200 
End bp1734333 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content66% 
IMG OID639324161 
Producthypothetical protein 
Protein accessionYP_789749 
Protein GI116051418 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.918672 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAACT ACCTGCAGAT CCTCCGGGAA ACCCTGAAGG CCATGCTGTC CAAGCCGATG 
TGGCTGATGG TCGTGGCCTC GGTGTGCATC ACCTCGCTGC CGTACATGAA CCACACCGCC
CTCGACCTGC CGGTGGCGGT GGTCGACGAG GACCACAGCG ACGTGTCGCG CGAGCTGGTC
CGGCTGCTCG ATTCGGCGCC GAAGGTCGCC GTGGTCGGCT ACGACAGCCT GCCGCAGGCC
AAGCGCGACC TGGCCTGGCG CGAGCTGTAC GCGATCATCG TGATCCCGCT GAACTTCGAG
AAGCGCCTGC TGCGCGGCGA GGCGCTGGTG ATCCCGTACT TCGGCGACGC CACCAACCGC
ATGGCCAACG GCCAGATCCA GCAGGACATC TCGGCGGTCT ACAGCGCGCT GACCAACCGC
TACAACGCCG CCCTGCTGGA ACGCGAAGGC TTCACCGCGA CCCAGGCGCA GGTGGTGCTG
AGCCCGCTGG TAGGGCAATT GACCGACCTG TTCAACCCCG GTATCAGCTT CGCCGCGATC
GTTCTTCCGG GGCTGCTGTC GCTGATCCTG CAACACAGCC TGCTGCTCGG CTGCACCCGC
GGCAACATCA TGCTGCGCGG CGGCACCCCG CGCTACATGC GCCAGCCGCT GTCGACCCGC
TTCGGCCGCT ACAGCGCGCA ACTGCTGATC TGGACCGTGC TGGCGATGCT CTTCTACGTG
ATCTGGCCGC ACCTGCTGGG CTATCGCCAG TCGGCCTCGT TCTTCATGCT GCTGGGGATC
GTCCTGCCGT TCCTGATCGC GGTGATCGCC CTCAGCGAGT TCATCGCCGA GCTGCTGCCC
ACCGAGGAAT CGGTGTACCT GACCATGACC TTCATCACCC TGCCGCTGTT CTACATGGCC
GGCTACAGCT GGCCGGAACA GGCCATGCCG GACTGGGTAC GCTGGCTGGC CGACGCGATC
CCCTCGACCT GGGCGATCCG CGCCATCGCC GAGATGAACC AGATGGACCT GCCGCTGCGC
GAAGTCAGCG ACCATGCCCT GGTGCTGCTG GGCATGGCCG CCACCTATGC GTTGCTGGGT
ACGCTGCTGT ACCAGTACCG CAACTGGCGC TGGGACAACA TCAAGGGTTG GTGA
 
Protein sequence
MKNYLQILRE TLKAMLSKPM WLMVVASVCI TSLPYMNHTA LDLPVAVVDE DHSDVSRELV 
RLLDSAPKVA VVGYDSLPQA KRDLAWRELY AIIVIPLNFE KRLLRGEALV IPYFGDATNR
MANGQIQQDI SAVYSALTNR YNAALLEREG FTATQAQVVL SPLVGQLTDL FNPGISFAAI
VLPGLLSLIL QHSLLLGCTR GNIMLRGGTP RYMRQPLSTR FGRYSAQLLI WTVLAMLFYV
IWPHLLGYRQ SASFFMLLGI VLPFLIAVIA LSEFIAELLP TEESVYLTMT FITLPLFYMA
GYSWPEQAMP DWVRWLADAI PSTWAIRAIA EMNQMDLPLR EVSDHALVLL GMAATYALLG
TLLYQYRNWR WDNIKGW