Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_00790 |
Symbol | prlC |
ID | 4380414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 76354 |
End bp | 78399 |
Gene Length | 2046 bp |
Protein Length | 681 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639322622 |
Product | oligopeptidase A |
Protein accession | YP_788223 |
Protein GI | 116053788 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0339] Zn-dependent oligopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.983257 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGCGA ATCCCCTTCT GCAGGCCTAC GACCTGCCGC CTTTCTCCTC CATTCGCCCG GAACACGTGA AGCCGGCCAT CGAGCGGATC CTCGCCGATA ACCGCGCCGC CATCGCCCGC CTGCTGGAAA CCCAGCGCGA GCAGCCGACC TGGAAGGGCC TGGTGCTGGC GATGGACGAA CTCAACGACC GTCTGGGCGC CGCCTGGAGT CCGGTCAGCC ACCTCAACGC GGTGTGCAAC AGCGCCGAGC TGCGCGAGGC CTACGAGGCC TGTCTGCCGG AGCTGTCGGC CTACTCCACC GAGCTGGGGC AGAACCGCGC CCTGTTCGAG GCCTACGAGG CGCTGGCGAA GAGCCCCGAG GCGGCCGGCT TCGACGTGGC CCAGAAAACC ATCCTCGAAC ACGCCCTGCG CGACTTCCGC CTGTCCGGCA TCGACTTGCC GGCGGACAAG CAGAAGCGCT ATGCCGAGGT GCAGTCGCGC CTGTCCGAGC TGGGTAGCCG TTTCTCCAAC CAGCTGCTCG ACGCCACCCA GGCCTGGACC AAGCATGTCA CCGACGAAGC CGCGCTGGCC GGCCTGACCG ATTCGGCCAA GGCCCAGATG AAGCAGGCCG CCGAGGCCAA GGGCCTGGAC GGCTGGCTGA TCAGCCTGGA GTTCCCCAGC TACTACGCGG TGATGACCTA TGCCGATGAC CGCGCCCTGC GCGAAGAGGT ATACGCCGCC TACTGCACCC GCGCCTCCGA CCAGGGCCCG AACGCCGGGC AGAACGACAA CGGTCCGGTG ATGGAAGAGA TCCTCGACCT GCGCCAGGAG CTGGCCGGCC TGCTCGGCTT CGCCAACTAC GCCGAGCTGT CGCTGGCGAC CAAGATGGCC GAGTCCAGCG ACCAGGTGCT CAGCTTCCTC CGCGACCTGG CGGTGCGCAG CAAGCCGTTC GCCGCCCGCG ACCTGGAGCA GCTGCGCGCC TACGCCGCCG AGCAGGGCTG CACCGAATTG CAGAGCTGGG ACGCCGGCTA CTACGCCGAG AAACTCCGCG AGGCGCGCTA CAGCGTGTCC CAGGAGGCGC TGCGTGCCTA CTTCCCGGTG GACAAGGTGC TTTCCGGCCT GTTCGCCATT GTCGAGCGCC TCTACGGCAT CCAGATCCGC GAACTGCACG ATTTCGAGCG CTGGCACGCC GACGTACGCC TGTTCGAGAT CCTCGAGAAC GGCGAGCACG TCGGCCGCTT CTACTTCGAC CTCTATGCCC GCGCCAACAA GCGCGGCGGT GCCTGGATGG ACGGCGCCCG CGACCGCCGG CGCGACGCCC AGGGCCGGCT GATCGACCCG GTGGCCTACC TGGTGTGCAA CTTCACCCCG GCGGTGAACG GCAAGCCGGC GCTGCTGACC CACGACGAGG TCACTACCCT GTTCCACGAG TTCGGCCATG GCCTGCACCA CCTGCTGACC CGCGTCGAGC ATGCCGCCGC CTCGGGGATC AACGGGGTGG CCTGGGACGC CGTCGAGCTG CCCAGCCAGT TCATGGAGAA CTGGTGCTGG GAACCGGAAG GCCTGGCGCT GATCTCCGCC CAATACGAGA CCGGCGAGGC GCTGCCGCAG GACCTGCTGG AGAAGATGCT GGCGGCGAAG AACTTCCAGT CCGGGATGAT GATGGTCCGC CAGCTGGAGT TCTCCCTCTT CGACTTCGAG CTGCACGCTA CCCACGGCGA CGGCCGCAGC GTGCTGCAGG TACTCGAGGG CATCCGCGAC GAAGTGGCGG TGATGCGTCC GCCGGCGTAC AACCGCTTCG CCAACAGCTT CGCGCACATC TTCGCCGGCG GCTACGCGGC CGGTTACTAC AGCTACAAGT GGGCCGAGGT GCTGTCCGCC GATGCCTTCT CGCGTTTCGA GGAAGAAGGC GTGTTCAACC CCGATACCGG GCGTGCCTTC CGCGAGGCGA TCCTGGCCCG CGGCGGCTCC CGCGAGCCGA TGCTGTTGTT CGTCGACTTC CGCGGTCGCG AGCCGTCCAT CGACGCCCTG CTGCGTCACT CCGGGCTGGT CGGGGAGGCC GCATGA
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Protein sequence | MSANPLLQAY DLPPFSSIRP EHVKPAIERI LADNRAAIAR LLETQREQPT WKGLVLAMDE LNDRLGAAWS PVSHLNAVCN SAELREAYEA CLPELSAYST ELGQNRALFE AYEALAKSPE AAGFDVAQKT ILEHALRDFR LSGIDLPADK QKRYAEVQSR LSELGSRFSN QLLDATQAWT KHVTDEAALA GLTDSAKAQM KQAAEAKGLD GWLISLEFPS YYAVMTYADD RALREEVYAA YCTRASDQGP NAGQNDNGPV MEEILDLRQE LAGLLGFANY AELSLATKMA ESSDQVLSFL RDLAVRSKPF AARDLEQLRA YAAEQGCTEL QSWDAGYYAE KLREARYSVS QEALRAYFPV DKVLSGLFAI VERLYGIQIR ELHDFERWHA DVRLFEILEN GEHVGRFYFD LYARANKRGG AWMDGARDRR RDAQGRLIDP VAYLVCNFTP AVNGKPALLT HDEVTTLFHE FGHGLHHLLT RVEHAAASGI NGVAWDAVEL PSQFMENWCW EPEGLALISA QYETGEALPQ DLLEKMLAAK NFQSGMMMVR QLEFSLFDFE LHATHGDGRS VLQVLEGIRD EVAVMRPPAY NRFANSFAHI FAGGYAAGYY SYKWAEVLSA DAFSRFEEEG VFNPDTGRAF REAILARGGS REPMLLFVDF RGREPSIDAL LRHSGLVGEA A
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