Gene P9303_09651 details

Gene Information

• Locus tag: P9303_09651
• Symbol: srmB
• ID: 4777768
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9303
• Kingdom: Bacteria
• Replicon accession: NC_008820
• Strand: +
• Start bp: 877054
• End bp: 878964
• Gene Length: 1911 bp
• Protein Length: 636 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 640086475
• Product: putative ATP-dependent RNA helicase
• Protein accession: YP_001016981
• Protein GI: 124022674
• COG category: [J] Translation, ribosomal structure and biogenesis; [K] Transcription; [L] Replication, recombination and repair
• COG ID: [COG0513] Superfamily II DNA and RNA helicases

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 15
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGGGCGTT GTCTGCCTGA TTTAAAGGAT CAATCAGGCA GACAACGCCT TTTCTCGATG 
ACCCATACAA AATCGCACGA GGATGTCTCG TGTTCCCCTG AGAAGAGTGC GCCTGAGATC 
TCTTCAACGA GCTCGGATGA TGGTTTAACC ACTGTGGCTG AGGCCACCAA TCAAAACAAT 
TCAGACGATG GCTCGGTCGC TGTAGCCGCT GAGGCCTGTG AAGATATTGA AGCGACAGAG 
TTAGTTTCCG AATTCGATTG TTTTGGCTTT AGCGAGCCGT TGCTCAAAAC CCTTGCAGAA 
AAGGGTTATA AGCAACCCTC TCCAATTCAG AAAGCTGCTA TTCCAGAATT GATGCTGGGT 
CGTGATCTAG TTGGTCAGGC TCAGACTGGA ACAGGCAAAA CAGCAGCTTT TGCGTTGCCC 
CTGATCGAGC GGCTTCAGGA TCATGGCAGT CGTCCCCAAG TGTTGGTGCT GGCCCCGACC 
CGGGAGTTGG CGATGCAGGT CGCGGATTCG TTCCGTGCTT ATGCCGTTGG CCATCCGCAT 
CTCAAAGTTT TGGCGGTTTA TGGCGGAGCC GATTTCCGCT CTCAGATCAA TACGCTGAAG 
CGTGGAGTGG ATGTTGTGGT AGGTACCCCG GGCCGCTTGA TGGATCACAT GCGGCAGGGC 
ACTCTCGACA CCTCTGGTTT GAGGTGTTTG GTGCTTGACG AAGCCGATGA AATGCTGCGT 
ATGGGCTTCA TCGATGATGT CGAATGGATC CTGGAGCAGT TGCCTAAAGA ACGTCAGATG 
GTGCTGTTTT CGGCAACGAT GCCATCAGAG ATCCGTCGAC TTTCGAAGCG TTACCTACAC 
GAACCAGCAG AGATCACGAT CAAGAGCCGT GATCAGGAGG CTCGTCTCAT CCGTCAGCGA 
TGCATCACTC TCCAGAACAG CCACAAACTT GAAGCCCTTA GAAGGGTTCT TGAGGCTTTC 
ACTGGTGAGG GAGTGATTAT TTTTGCCCGC ACCAAGGTGA TCACTCTCAC AGTTGCTGAG 
GCACTGGAAT CCGCTGGACA CGATGTTGCC GTACTGAATG GGGATGTCCC TCAGAACCAA 
CGGGAACGAA CGGTTGAACG TTTGCGCAAA GGCAGCGTGA ATATCTTGGT TGCTACTGAT 
GTTGCCGCTC GCGGCCTAGA TGTCGATCGC ATCAGCCTGG TGATCAACTA CGACATCCCC 
TTTGATAGCG AAGCCTATGT GCATCGCATC GGGCGTACCG GCCGGGCTGG CCGCAGTGGA 
GAGGCCATTT TGTTCGTGAA TCCTAGGGAA CGTCGCTTTG TGGGCGGCTT TGAACGTGCT 
GTAGGTCAAC CCATCGAACC GATGGATATC CCCAATAATG CAGCGATTAA CCAGAGTCGT 
CTTGATCGCC TTCGTCAACG CCTCACCACT GCCGCTAAGA CGGAGAGAGA TAACTCTGAG 
GAGACAGCCC TTCTCCAGGA GCTAATCCAG CGTGTTGTTG AGGAGCTCAG CCTCAGTCCA 
GAGCAATTGG CTGTAGCAGC ATTAGAGCTT GCTGTTGGCC CAGGCCCAAT CTTGGTGCAG 
GCTGATGAGG GCTGGTTGCA GCAATCAACT CAGCGCAGCC GCCGCAACGA TCGTCACGAA 
ATTAGTCGTG GAGGCTCTGG CCGAAGACCT GAGCGTTCAT CGAGACCGCC GGAAGATCAC 
ATGGAGCGCT TTCGTGTGGA AGTCGGTCAC CGCGATCGTG TCAAGCCTGG CAATCTGGTT 
GGTGCCATCG CCAATGAATC CGGGCTTGAA GGACGGATGA TTGGTCGCAT CCAGATTTTT 
GAGTCGCACA GTCTTGTGGA TCTTCCCAAA GGAATGCCTG AGGATGTTTT TAAAGATCTA 
AAACGTCTCA AGGTGATGAA TCGAGAGTTG CATATCCAGC GCGCTTCTTA A 

 

Protein sequence

MGRCLPDLKD QSGRQRLFSM THTKSHEDVS CSPEKSAPEI SSTSSDDGLT TVAEATNQNN 
SDDGSVAVAA EACEDIEATE LVSEFDCFGF SEPLLKTLAE KGYKQPSPIQ KAAIPELMLG 
RDLVGQAQTG TGKTAAFALP LIERLQDHGS RPQVLVLAPT RELAMQVADS FRAYAVGHPH 
LKVLAVYGGA DFRSQINTLK RGVDVVVGTP GRLMDHMRQG TLDTSGLRCL VLDEADEMLR 
MGFIDDVEWI LEQLPKERQM VLFSATMPSE IRRLSKRYLH EPAEITIKSR DQEARLIRQR 
CITLQNSHKL EALRRVLEAF TGEGVIIFAR TKVITLTVAE ALESAGHDVA VLNGDVPQNQ 
RERTVERLRK GSVNILVATD VAARGLDVDR ISLVINYDIP FDSEAYVHRI GRTGRAGRSG 
EAILFVNPRE RRFVGGFERA VGQPIEPMDI PNNAAINQSR LDRLRQRLTT AAKTERDNSE 
ETALLQELIQ RVVEELSLSP EQLAVAALEL AVGPGPILVQ ADEGWLQQST QRSRRNDRHE 
ISRGGSGRRP ERSSRPPEDH MERFRVEVGH RDRVKPGNLV GAIANESGLE GRMIGRIQIF 
ESHSLVDLPK GMPEDVFKDL KRLKVMNREL HIQRAS