| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1562 |
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| Symbol | |
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| ID | 6207322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 1936244 |
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| End bp | 1937596 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641691203 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001818446 |
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| Protein GI | 182413380 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.796996 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCCG ACGCCGGCCA CCCGAGCCGC CCCGTGCTGC AACCGCCTCA TCCGCCCCAT
CCGCCCGGGC TGCGCGCCCG GCGCGGCCTG AACTGGGCCA CGGTGGGCCT GATGTACACG
AGCTACTATT TCTGTCGCTA CAACTTCTCG TATGCAAACA AGGCGATCAA GGACGAGTTC
GGGTTCACGA ACTCGGACAT GGCGACGATG CTGTCGGCGC AGTTTATCGC CTACGGTTGC
GGGCAGATCA TCAACGGGCT GCTGACCGAT CGCATCGGCG GCAAGAAGGC GATGCTGATC
GGCGCGGCCG GCACGATCAC GGTCAACCTG CTGTTTGGCG CGGCTTCGTT CTGGGGCATG
CTGAGCCTGT TTTCGCTACT GTGGGGCCTC AACGGCTACA TCCAGTCGTT TGGCTCGCCC
GGGTTCATCA AGATCAACAG CGCGTGGTTC AGCGAAAAGC AGCGCGGCAC GTTTGCGGGG
ATCTTCGGGT TCATGATCAA CCTCGGCCGG CTGGCGGCGA ACAAGCTGCT GCCGCTGCTG
CTGGCGGGCT TCGCGATCGG CACGATGATG AACGTGCCGC CGCTGCACTG GCGCTGGGTG
TTCTGGGTGC CGGCGATCAT CGCCTCGATC GTGGCGGTGG TGTTCGCGTT CGTGGTGAAG
GACACGCCGG AGGAGGCCGG CTTCCACGAT GTCTTCAAAG GCGAAGCAGA TCACGCGGAA
ACCAACGTTC GCGCGGAGAT CTGGCCGGTG CTGACGCATA TCGTGACGAA CCCGATGGTG
TGGATCATCG CGCTGGCGTA TGCGTGCACC GGCGCGGTGC GGCAGGCGAT CGACCAGTGG
TTCCCGGTGT ATTTCCAGGA AGTGCATCAC CTCAAGATGA CGGGCGCGCA GTTCCAGTGG
TTGGGCTACA TGATCCCGCT GGTGGCGTCG TGCGGGTCGT TTCTTTCCGG TTGGGTGTCG
GACCGTTTTT TCCAGTCGCG GCGCGCGCCC GTGGCCGGCG CGGTCTACAT CATCGAGATG
GTCGTCATTC TGGCGGCGAC GCAGGTGCAC ACGGTGGGCT GGGCGATCGG GTTCTTCATC
ATGGTGTCGT TCACCGTGAA CTCCACGCAC TCGCTACTCG GGCCGGCGGC GGCGATGGAT
ATCGGCGGCC GCAAGATGGC GGCGTTCGCC TCGGGCTGCA TCGACGCCTT CCAGTATTTC
GGCGCGGCGC TGGGGATGAC GATCCTCGGC TACGTCCTCG ATAATTACGG CTGGGGTTAC
TACTTTTACT ACATGCTACC GTTCGGCGTG GTCGGATCGA TTTTGATGTT CTCGATTGCG
CACCGGAAGA GCCTGAAGAA GGGCGCGAAG TAA
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| Protein sequence | MSSDAGHPSR PVLQPPHPPH PPGLRARRGL NWATVGLMYT SYYFCRYNFS YANKAIKDEF
GFTNSDMATM LSAQFIAYGC GQIINGLLTD RIGGKKAMLI GAAGTITVNL LFGAASFWGM
LSLFSLLWGL NGYIQSFGSP GFIKINSAWF SEKQRGTFAG IFGFMINLGR LAANKLLPLL
LAGFAIGTMM NVPPLHWRWV FWVPAIIASI VAVVFAFVVK DTPEEAGFHD VFKGEADHAE
TNVRAEIWPV LTHIVTNPMV WIIALAYACT GAVRQAIDQW FPVYFQEVHH LKMTGAQFQW
LGYMIPLVAS CGSFLSGWVS DRFFQSRRAP VAGAVYIIEM VVILAATQVH TVGWAIGFFI
MVSFTVNSTH SLLGPAAAMD IGGRKMAAFA SGCIDAFQYF GAALGMTILG YVLDNYGWGY
YFYYMLPFGV VGSILMFSIA HRKSLKKGAK
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