| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0774 |
|---|
| Symbol | |
|---|
| ID | 6208595 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 942570 |
|---|
| End bp | 943025 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641690397 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001817662 |
|---|
| Protein GI | 182412596 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1335] Amidases related to nicotinamidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCCA TTATCATCGT TGACCTGCAG CAGGATCTGC CGGTGCCGCC CGAGCTCGTG
CGCCGTATCG AGGCGCGTTC CCGCGAGTTT CCGCGGCGGG TCTTCACCAA GTTCATCAAC
GAGCCCGGTT CGCTTTTCCG CACCAAGCTC GGTCGCAACT CGTGCCTGCC GGGTACCCCC
GGCGCCGAGC TCACGCTGCC GACCACCGAC GCGGACCTCG TGCTGGAGAA GCCAGGCTAC
GGACTCGGGC CGATGCAGAT CGCGCAGATC CGGGCGGCGG GCATTCAAAA AGCATTGGTC
TGCGGCGTGG ACACCGACGC CTGCGTGCTG GGCGTGGTCT TCTCGCTGTT CGACGCCGGG
ATTGATTGCG AAGTCGATCG CGAACTCTGC TGGAGTTCCA GCGGGTTGCA CGAGGCCGCG
TTGAAGATCG TCCAGGAGCA ATTCGGCACC GGTTGA
|
|---|
| Protein sequence | MDAIIIVDLQ QDLPVPPELV RRIEARSREF PRRVFTKFIN EPGSLFRTKL GRNSCLPGTP
GAELTLPTTD ADLVLEKPGY GLGPMQIAQI RAAGIQKALV CGVDTDACVL GVVFSLFDAG
IDCEVDRELC WSSSGLHEAA LKIVQEQFGT G
|
|---|
| |