Gene Oant_3854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOant_3854 
Symbol 
ID5381560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOchrobactrum anthropi ATCC 49188 
KingdomBacteria 
Replicon accessionNC_009668 
Strand
Start bp1260972 
End bp1262291 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content56% 
IMG OID640836539 
Productextracellular solute-binding protein 
Protein accessionYP_001372388 
Protein GI153011174 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGACCA AGTCTTATGT TGCAGGGCTT ATTGCGTCTG CTGCAAGTGT TGCAGTTATG 
GCCGGGGCTG CGTGGGCGGA AGAGCTCACC ATCGCGACGG TCAATAATGG TGACATGATC
ATCATGCAGA AACTGTCGCC GGAGTGGGAA AAAGCGACCG GCAATAAAAT CAACTGGGTT
GTGCTTGAAG AAAACGTGCT GCGTCAGCGC GTCACGACCG ATATCGCTAC CAAGAGCGGC
CAGTTCGATA TCCTGACCAT TGGTGGTTAC GAGACGCCGA TCTGGGGCAA GGCTGGCTGG
CTTCTGTCGG TGGATGATCT TGGTGATGAT TACGGCTATG ACGATCTCAT CAAGCCGGTT
CGCGCCGGTC TGACGGTCGA TGGCAAGCTT TACGCCGTGC CGTTCTATGC CGAAAGCTCG
TTTACGCTCT ATCGCAAGGA CTTGTTTGAC GCGGCGGGCC TCAAGATGCC CGATGCGCCA
ACCTATGCGG AAATCAAGGA TTTCGCGACC AAGCTGACCG ACAAGTCGAA AGAACAATAT
GGTCTCTGCC TGCGTGGAAA GCCGGGCTGG GGCGAAAACA TGGCTTACCT CGGCACGCTG
ATCAATACGT TCGGTGGCAG GTGGTTCGAT GAAAACTGGA AGCCGCAGAT CAATTCGGAC
GAATGGAAGA AGGCGATTAA CTTCTACGTC GATCTGATGA AGGAAGCGGG CCCTCCCGGA
ATTACGTCAA ACGGCTTCAA CGAAAATCAG GCCCTGTTCT CGACCGGCCA TTGCGCCATG
TGGATCGACG CCACTTCGGC TGCCGGACGC ATCTATGATC CGAAGCAGAG CCAGGTTGCC
GACAAGGTTG CCTTTACCAA GGCACCGGTC GAGGTGACGC CAAACGGTTC TTCATGGGCG
TGGTCCTGGA ACCTCGCAAT TCCGGCATCG AGCAAGAAGG TGGAAGCCGC GAAGTCGTTC
CTGAAATGGG CGACCTCGAA GGAATATGTC GAGCTCGTCG GCAAGTCCGA AGGCTGGGTT
GCTGTTCCTC CGGGCACACG CCAGTCCACC TATGCCAACG AGGAGTACAA GAAGGCGGCT
CCTTTTGCGG ATACGGTGCT GAAAGCCATC GAATCTGCCG ATCCGACTAA ACCGACCAAG
GACCCCGTTC CTTATACCGG CATCCAGTTC GTGGCCATTC CTGAGTTCCA GGCAATCGGT
ACGCTTGTCG GGCAGGCGGT TTCGTCGGCT GTTGCGGGTC AACAGAGCGT CGATGCAGCA
CTCGACGGCG CGCAGCGTCA GGTCGAACAG ATCATGACGC AGTCCGGTTA CATCAAGTAG
 
Protein sequence
MRTKSYVAGL IASAASVAVM AGAAWAEELT IATVNNGDMI IMQKLSPEWE KATGNKINWV 
VLEENVLRQR VTTDIATKSG QFDILTIGGY ETPIWGKAGW LLSVDDLGDD YGYDDLIKPV
RAGLTVDGKL YAVPFYAESS FTLYRKDLFD AAGLKMPDAP TYAEIKDFAT KLTDKSKEQY
GLCLRGKPGW GENMAYLGTL INTFGGRWFD ENWKPQINSD EWKKAINFYV DLMKEAGPPG
ITSNGFNENQ ALFSTGHCAM WIDATSAAGR IYDPKQSQVA DKVAFTKAPV EVTPNGSSWA
WSWNLAIPAS SKKVEAAKSF LKWATSKEYV ELVGKSEGWV AVPPGTRQST YANEEYKKAA
PFADTVLKAI ESADPTKPTK DPVPYTGIQF VAIPEFQAIG TLVGQAVSSA VAGQQSVDAA
LDGAQRQVEQ IMTQSGYIK