Gene OSTLU_40872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_40872 
Symbol 
ID5002568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009360 
Strand
Start bp41829 
End bp42920 
Gene Length1092 bp 
Protein Length363 aa 
Translation table 
GC content58% 
IMG OID640417989 
Productpredicted protein 
Protein accessionXP_001418356 
Protein GI145347814 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.471917 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGAC GGACGACGCG ACCGACGACG CGCGACGCGC GACGCCGGAC GACGACGGCG 
ACGCGCGCGA CGACGACGAC GTCATCGACG GCGAAGGGAA TGGATGAAGA AGAGTCCGCG
CGGATGCGAA AGGCGCTGGC GGAGGATCTG ACGCACCTGT TCGACGACGA GGGGATCGAT
CCGTCGCTGT ACGCGAAAGA CGTGTCGTTC GAGGACCCGC TGACGAAGTA CGACTCGTTC
GACGGGTACG CGTTTAACAT TCAGATGCTG CGACGGGTGT TCTCGCCGAC GTACGCGATG
CATGAAATAT ATCAGAGCGG ACCTTGGGAG ATCACGACGC GATGGACGAT GGTGATGGGA
TTGCCGACGT TTCCTTTCGC TTGGAGACCG ACGCTGACTT TTACGGGAAC GTCCATCATG
GGGATCGACG AGGAGACTAA GAAGGTGACG CGCCACGTGG ACACGTGGGA TTCGATTGAG
AATCAGAGGC ATCTCAGTGC GGAGGGCGTG GTGGAGGTGC TGAAACAGAT TTTTGATTTC
GCGCAGACGC CGGATTTGGA CACCCCAGGG TACGTGGTGC TGAAGAAGAG GCGCGATTAC
GAAGTGCGAC GATACGAGCC GTACTTGGTC GCCGCCACGG GTCCGGGTCT GAACGTCAAG
GAAGTGTCGT CGAGCAGCGC AAAAATGAAC GGTCAAGTCG CGGGCCAAGC TTTTAATTCT
TTGGCGGGTT ACATCTTCGG CCAAGCCAAC GCGAGTGGGA CGAAAATGGA GATGACGACG
CCTGTGTTTA CGAAGAACGC CACGATGCAA TTTGTCGTGA GCGGCGACTC CGTGGACGCG
CTCCCAGCGA GCACGAATGA AAACGTAGTG TTGCGGGAAG AAAGTGGCGG TATTTTTGTC
GCTAAGAAAT TTTCTGGCGT CGCGACCGAG GAGGCGGCTC GTGACGTGGA GAAGCAGTTG
CGAAAATTGA TCGAGAACGA CGGTTTGGAG GCGAGCGGCG CCGCCGCGTT GGCGCAGTAC
AACGATCCAT TCACGAACCC GTTCCTCAGG CGAAACGAAA TCATCATTCC TGTGTCAAAT
TTCACGATGT AG
 
Protein sequence
MTRRTTRPTT RDARRRTTTA TRATTTTSST AKGMDEEESA RMRKALAEDL THLFDDEGID 
PSLYAKDVSF EDPLTKYDSF DGYAFNIQML RRVFSPTYAM HEIYQSGPWE ITTRWTMVMG
LPTFPFAWRP TLTFTGTSIM GIDEETKKVT RHVDTWDSIE NQRHLSAEGV VEVLKQIFDF
AQTPDLDTPG YVVLKKRRDY EVRRYEPYLV AATGPGLNVK EVSSSSAKMN GQVAGQAFNS
LAGYIFGQAN ASGTKMEMTT PVFTKNATMQ FVVSGDSVDA LPASTNENVV LREESGGIFV
AKKFSGVATE EAARDVEKQL RKLIENDGLE ASGAAALAQY NDPFTNPFLR RNEIIIPVSN
FTM