| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_119295 |
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| Symbol | Tdc |
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| ID | 5000165 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009356 |
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| Strand | + |
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| Start bp | 18103 |
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| End bp | 21063 |
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| Gene Length | 2961 bp |
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| Protein Length | 876 aa |
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| Translation table | |
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| GC content | 57% |
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| IMG OID | 640415586 |
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| Product | transducin / WD-40 repeat protein, putative |
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| Protein accession | XP_001416047 |
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| Protein GI | 145341920 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCACGG CGGCGGCGCG CGCGCTCGCG GCAGTCGTCG ATGCAGAACG GAGCGGTACG
TCGAGGGCGC GGCGCGACGC ACACGCGCGA TGTGCGCGCG CGATGAGATG AAGGAATCGC
GTTTGGATGC TGATGCCGAT GATTGACGCG ACGAACGATG GATGGCGGAC GCGTCGACGC
ATTCGACGAC GACGCACCGC GAACGAATCG ATCGCGATCG ATGCGCTCGT AGACTGACGC
GGGTGATGAC GCACACGCAG TGACGAACGT GGCGAAAGGG CGGGTGTTGA ACCGAATGGA
GGAATACGTC GACGTCGAGC GTCGCGAAGA CGGCGAAGAC GCGAGCGCGT TGGAGGTGCG
ATGATGACGA CGCGCGCGAA GTGACACGAA CCCTCGCGCG TGAAATGACG TCTGATGCGT
CGCAAACGGT CCGAGACTGA CGATTCTACG GTGCGGATGC CGACGACGTA CCCAATCTAG
GTGGCGCCGA TTACCGTGTA CGAGACAAAA TACGTCGAGG CGCAGTTGCG AATGATCGCC
GTGAACGATG CTTTCATATG TTACGGTATT CGAAACGGGT TGATTCGAGT GTTTTCTAGA
AAGTCTGGCA ATGTGCGATC GTTGCTTCGC GGACACTCCG ATTCAATCTC GACGCTCAAG
TTTTTGGCGA ACACCGACGT GTTGCTCTCG GTGGACGTGC GAGGACGGGT GATGGTTCGC
AAGTTGAGTT TACAAGGCGC CGACGATGGG GCCTCGATCG ATGTGAGCGA CGATAACGAT
GCGGGATGGA CGATCGGTTC GCAGAATTTG GTAGACTTCG ACTTCGCAGT GGACACCCCG
GACGGGCACC TGCCGCCGTC GGCGTGCTGG CTCCCGCTAG ATTCGCGAAA ACCCGGCAAG
TGTGAATTCG CCCTGAGCGC GGGGACGTGC GTGGTGTGCT ACGAGTGCTC GCTGATGAAG
AAAGGGGATG CAATTGCGGC TGAGATCGAT CTCAACGCCC CGCCAGCCAT GGATGGTTTA
CAGGTGATCG AGTTTGATGC CCCGGTGTCT TGCGTGGACA GCGCCCCCGC GGGTCGCAAG
CTCGTCGCCG CGAGCGAGGG CCGTGCGTAC GTTTTGGTGA AGGAGGACGG TGAAACGGAG
TTTGAGTGCA CGGATACACT TCCATGGACG GTGGAAACCG CCGTCTTCGC CTCGGCTGAA
CGCGTAATTC TGGGTAACGA TAATAACTCA GAGTTGATCG TCGTCGACGT GACGCAAGAA
ACTCCTTTCG CGGTGCAGCG CGTCGTCTTT AAGTCAGACA GTGACAAACT TTTCAACGTA
TGCTTGCAGC ATAACCCCGA AACAGGAATC GTATTGCTTT CGAACACGCG TATGAACACG
GTGTACGCTT TACACTTCGA GAAGAGCTTT GATTACATTG CGCGCTTTGA GGCGTCGCAA
CCGATTTTGA GCTTTGACTC CCACGTGAAG TACGATGGCG ACGGCAGTGC GACGATGCAA
TTGTTTTGCT TACAGACGCA AGCGATTCAA ACCTTGTCCA TGCCGGCTGA AGCATGCATT
CCACCAGACG GAGCTCTCGA GGCGCTCGGC TCGTTGGGTA CGCCCAAGAC GAAAGGTTCG
CTCGAGCACT CATCTTCAGC CACTCTGCTC ACTCCGGATA TGTTTGGCGG CGCTGAGCTC
GCCGGCGACG AGGAGGACGA AGAGGAAGAG CGTGCAGCGG TAGTTCCATC GAAAAAGGCT
GCTGCGGCCC AACCAGCGTC GTCCGAAGAA AGCATGGGCG AGTCTGGTGC AGAGGAAGAA
GAGGGAGAAG ATGAAGAGTT TGAGTCTGCC AACATGAGTG AGAGCGGCGC TGGTGCGATT
CCCGTCGCCG CCGCGTTCGA TATGAAGCAG TTGAGAGCGA CTATTCGTAA CGAAATGCGC
GAACTTCTGA ACGAAGTTCG CGATGAGCGT CGTCTGGCTG CAGAAGAGCG CAAGGCAGAC
ATGGAACGCG CTCGTAAGGC GAACGAAACC GCGGCAGCCA ACTTGAAGCG AGACGTCACG
AATGCTATCG CGGCTCTGTT GCAACAACAT TCCGTGGACA ATGCAAAGAC TTTGGAAGCT
GGCATCGGAC GCGCTCAATC TGTTGCTGCA ACAAGCGCGC AAACTGCGAT GAAGTCCATC
GTCGGTCCAT CCATTGACGC CGCTGTTCGA GCGCAGATGG AAACCTCCGT CGTGCCAAAA
ATGGAAATCG CGTGCTCGAC GATGTTTACG CAAGTCAAGC ACACGTTTGA ACGAGGTATG
GCTGACTTGA ACACCGAGCT TCTCGCTGCG AGAGAATCTG CGGCAATTTC TCAAGCGACG
CCGTTCGTCT CCGGTTTGCG CCAGGCGACG ACCGAGGTTC GCCAAGCCGC AACAGCTTTG
ATGACCGATA TCCCAAATCA AGTCGCGCAA GCCATGGCGA AGGTCACGGC GCGCGCACCT
TCGGGCATGG GCGCACCTCC CGGGATGGCC CCAAAGAGCG TGACGCAAGG TAAGACGCTC
GCTCAAATCG AACAGCGCTT GGACCCAACT GTGGAGATCA GCAAGTTGCT ACAGGCAAAC
CAAATCGACC GCGCGTTCAA TCTGGCGCTC AGCATGAGCA AGGTTGAAGT CGTCATGTGG
CTCGTCAACC AAGTTGCGAG TGATCGAATC TTTGGCCAAA CACCGTGTCC GTTGTCGCAA
GGTGTGCTCT TGTCGCTTGT TCAGCAGCTT TCGAGCGATT TGACGACGCC AGACGCGCCC
AAGAAGCTCG ATTGGATTCG AGATTCTTGC CTCGCCGTCG ATCCGGCGGA TCCCGTGTTG
CGGCAACACA TGCGGCCGGT GCTCAGCACG GTGCACCAGT CGCTCATGGC TGCGGCCAAT
TCACCGACGA GTGCGCCAGA AGTACGCGCG GGGACACGAT TGTGTATCCA CGTCGTGAAT
TCCATGTTAT CTTCTTTGTA A
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| Protein sequence | MSTAAARALA AVVDAERSVT NVAKGRVLNR MEEYVDVERR EDGEDASALE VAPITVYETK
YVEAQLRMIA VNDAFICYGI RNGLIRVFSR KSGNVRSLLR GHSDSISTLK FLANTDVLLS
VDVRGRVMVR KLSLQGADDG ASIDVSDDND AGWTIGSQNL VDFDFAVDTP DGHLPPSACW
LPLDSRKPGK CEFALSAGTC VVCYECSLMK KGDAIAAEID LNAPPAMDGL QVIEFDAPVS
CVDSAPAGRK LVAASEGRAY VLVKEDGETE FECTDTLPWT VETAVFASAE RVILGNDNNS
ELIVVDVTQE TPFAVQRVVF KSDSDKLFNV CLQHNPETGI VLLSNTRMNT VYALHFEKSF
DYIARFEASQ PILSFDSHVK YDGDGSATMQ LFCLQTQAIQ TLSMPAEACI PPDGALEALG
SLGTPKTKGS LEHSSSATLL TPDMFGGAEL AGDEEDEEEE RAAVVPSKKA AAAQPASSEE
SMGESGAEEE EGEDEEFESA NMSESGAGAI PVAAAFDMKQ LRATIRNEMR ELLNEVRDER
RLAAEERKAD MERARKANET AAANLKRDVT NAIAALLQQH SVDNAKTLEA GIGRAQSVAA
TSAQTAMKSI VGPSIDAAVR AQMETSVVPK MEIACSTMFT QVKHTFERGM ADLNTELLAA
RESAAISQAT PFVSGLRQAT TEVRQAATAL MTDIPNQVAQ AMAKVTARAP SGMGAPPGMA
PKSVTQGKTL AQIEQRLDPT VEISKLLQAN QIDRAFNLAL SMSKVEVVMW LVNQVASDRI
FGQTPCPLSQ GVLLSLVQQL SSDLTTPDAP KKLDWIRDSC LAVDPADPVL RQHMRPVLST
VHQSLMAAAN SPTSAPEVRA GTRLCIHVVN SMLSSL
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