Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_10034 |
Symbol | |
ID | 5000597 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009357 |
Strand | - |
Start bp | 159108 |
End bp | 161735 |
Gene Length | 2628 bp |
Protein Length | 826 aa |
Translation table | |
GC content | 62% |
IMG OID | 640416018 |
Product | predicted protein |
Protein accession | XP_001416860 |
Protein GI | 145344690 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0826] Collagenase and related proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CCGGAGGTGC TCGCGCCGGC GGGCGGATGG CCGCAGTTGC GCGCGGCGAT CGAGACCGGC GCGGATTGCG TGTACTTTGG GCTCGACGCG CTGAACGCGC GCGCGCGGGC GAGTAATTTT ACGCTGGATG AGCTGGATGA GGTGATGGCG TACGTGAAGT CGCGCGGGCG GCGAGCGTAC GTGACGATGA ACGTGTTGGT GTTCGACGAG GAGTTGCGGT TGGCGGAAAC GCTGATTCGA GGCGTGGCGC GCGCGGGCGT GGACGCGGTG ATCGTGCAGG ACGTGGGGGT GACGCGGTTG ATTCGGAAGA CGGCGCCGAA TTTGCCCATA CACGGGTCGA CGCAGATGAG CGTGACGAGC GCGGAGGGCG CGCGCTTCGC GCGAGAGCTC GGGTGCAAGC GCGTCGTCGT CGGTCGAGAG TTGAGCGTGA CGGACATCGC CGCGGTGAAA GCGAGCTGTC CGGACGTCGA GGTCGAGGCG TTCGTGCACG GGGCGATGTG CGTGAGCTAC AGTGGACAGT GCTTTTCGAG CGAAGCCTGG GGCGGTCGGT CGGCGAATCG CGGTCAGTGC GCGCAGGCGT GTCGAATGCC GTACGGATTG GTCGTCGACG GCGAGCTGCG CGAGATGGGG GATGTAAAAT ATTTGTTGTC ACCGCAAGAT TTAATGGCGG TCGAGCTCGT GCCCGAGCTC ATCGAATCCG GCGTGGGGTG CTTTAAAATC GAAGGACGAT TGAAAGGTCC AGAGTACGTC GCCATCGCCA CGCAGGCGTA TCGCCGCGCG GTGGACTTGG CGTGGGACGC CATGCAGAGC GGACGCGACG TGAAGCGCTC CGAATTGCTC TCGAAAGAGC AGCGACTGGA ACTCACGCAA GTGTTCGCGC GCGGCCAAGA CGCGGATTTC GATGGATTGA CGCGCGGTTT CCTGGAGGGA CCGCGGCATC AAAATCTCGT TCGCGGACGA GCCCCAAGGC ATCGCGGCGT CTTGCTCGGA GAAATCGTGC GCGTGATCAA GCCGGACGGC AGACGCTCGA ACGGTGAGAT AGTCGTACGC ACGAGCGACG GCGCGGCGAT GAAGCGCGGC GATGGCGTCG TCATCGATCG AGGCGAGCCG CAAGAGAAGG AGGAGGGCGG TCGCGTCTAC GAAATTTTTG ATCGCAATCG AGCGCTCGTG GGCGGTAAAG ACGACGACCG CATCACCGCG GGCGAGTACA CCGTTACGTT CGGTGCGAAC CAAATCGATT TCAACCGGGT CGAGGTTGGA CAGCTAGTGT GGAGAACATC CGACCCGACG CTCGAGGCCA AGCTCGCGAA GATGGTTCCC GCGGAGGCCG AGCCGAGTCG CGACGGTCGT CGAGATCCGT GCACCGTCGT CGCGAGTGGT GCGATCGGTG AACCGCTAGT CATCAAAATC ATCGATGATG CCGGACGATT CGGAGAAGCT CGCACTGGTT CTGTGTTGGA GAAGAGTCAA AACAAGGCGC TCGACGAAAA TTCGTTGAAG AAAGCCATCG GCGAACTCGG CGGAACGCCG CTCGTGGTGG CAAGTGTGGA TGTCTCCACC CTTCGAGGTA TCGCAGACGT CGACGCGCAG GCTACGGACG GACTTTACAT ATCACCGGGC GAGATCAAAG CTGCGCGGCG GGACGCAGTC GAGTCGCTCC TGCGAGCGCG GCGAGACGGT GGCCCGAATC GAGCCGAAGG TATGGCGGTG CGCGAAGTCG TCGACGAACT CGTCGGCAAC GCATGGTGGG GCGATATCAT CGATCAACGC GATAAAGGAG CGAGCAAAGA ACCGCGCGTG AATCCTACGA GCGGGTTGCC GTCCATCTCT GTGCTCTGTC GCACGCGCGC GCAAGCCGAA GCTGCGGTGA CTGTCGATGG CGTGGACGAA ATCGCTTTGG ACTTTTTAGA AGTTCACGGA TTGCAAAAAA CGGTTCGTCT CGTTCAAGCC GCGGGGAAAA CAGCCGTGGT CGCCACGCCG CGCGTGCTGA AGCCAGAAGA AGAGCAACTG TGGCGATACT ATCTCAATCT AGGCGCCGAC GCCCTGCTCG TGCGATCGGC GGGTTTATTA CAGACACTGC TCGAACTCGG GCGCTCGGAC GCCGATGTCG TCATTCCACC GCTTCGTGGT GACTTTTCAT TAAACGCCGC CAACGCAATC GGTGCGGACG TCTTTCTGAG GTCAGGACTC GAGCGCTTGA CGCCAACGCA TGACTTGAAC GCCGAGCAGC AACGCGCGCT CGCAGTCGCC CTCGGTCCCG CGGGCGCGTC CAAGCTCGAA GTCATCGTCC ATCAGCATTT GCCAATCTTC CATACCGAAC ACTGCGTGTT CTGTCGATTC ATGTCCGACG GAAACTCGTA CAAAGATTGT GGCCATCCAT GCGAGAGCAA GCACTTGCAC TTGCGAGACG ACCGCGGTGC CGACCATCTT GTCCTCGCAG ACATGGGGTG CCGAAACACC GTCTTCAACG CTCAGGCGCA AACGGGCGCG GAGTACCTGA AAACATTCAT CGACGCCGGC ATTTGCCACT TCCGCGTCGA GCTCGTGGAC GAGCCCGCGA GTGTGGTCCC CGAGCTTCTA TCGCGTTATC GCGACCTAGC GAACGGGCGC ACGTCCTCGA GCGAACTC
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Protein sequence | PEVLAPAGGW PQLRAAIETG ADCVYFGLDA LNARARASNF TLDELDEVMA YVKSRGRRAY VTMNVLVFDE ELRLAETLIR GVARAGVDAV IVQDVGVTRL IRKTAPNLPI HGSTQMSVTS AEGARFAREL GCKRVVVGRE LSVTDIAAVK ASCPDVEVEA FVHGAMCVSY SGQCFSSEAW GGRSANRGQC AQACRMPYGL VVDGELREMG DVKYLLSPQD LMAVELVPEL IESGVGCFKI EGRLKGPEYV AIATQAYRRA VDLAWDAMQS GRDVKRSELL SKEQRLELTQ VFARGQDADF DGLTRGFLEG PRHQNLVRGR APRHRGVLLG EIVRVIKPDG RRSNGEIVVR TSDGAAMKRG DGVVIDRGEP QEKEEGGRVY EIFDRNRALY TVTFGANQID FNRVEVGQLV WRTSDPTLEA KLAKMVPAEA EPSRDGRRDP CTVVASGAIG EPLVIKIIDD AGRFGEARTG SVLEKSQNKA LDENSLKKAI GELGGTPLVV ANVDAQATDG LYISPGEIKA ARRDAVESLL RARRDGGPNR AEGASKEPRV NPTSGLPSIS VLCRTRAQAE AAVTVDGVDE IALDFLEVHG LQKTVRLVQA AGKTAVVATP RVLKPEEEQL WRYYLNLGAD ALLVRSAGLL QTLLELGRSD ADVVIPPLRG DFSLNAANAI GADVFLRSGL ERLTPTHDLN AEQQRALAVA LGPAGASKLE VIVHQHLPIF HTEHCVFCRF MSDGNSYKDC GHPCESKHLH LRDDRGADHL VLADMGCRNT VFNAQAQTGA EYLKTFIDAG ICHFRVELVD EPASVVPELL SRYRDLANGR TSSSEL
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