Gene Nwi_1578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1578 
Symbol 
ID3676744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1725674 
End bp1726216 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content58% 
IMG OID637713134 
Product3-hydroxydecanoyl-(acyl carrier protein) dehydratase 
Protein accessionYP_318191 
Protein GI75675770 
COG category[I] Lipid transport and metabolism 
COG ID[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 
TIGRFAM ID[TIGR01749] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.245273 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAACC TTCGCAGCAG CTATGATTAC GAGGACTTGC TGGCTTGCGG CCGTGGCGAG 
ATGTTCGGCC CCGGCGAACC CAAACTTCCG TTGCCGCCGA TGCTGATGTT CGATCGCATC
ACGGAGATTA CCGAAGGCGG CGGGAAATAT GGACGCGGCC TGGTGCGCAC CGAGCTCGAC
ATCAAACCGA ACCTCTGGTT CTTCCAATGC CATTTTCAGA ACGACCCGGT GATGCCCGGC
TGTCTCGGTC TCGACGGGCT TTGGCAGATG GTGGGATTCT ATCTGGTCTG GCTTGGCCGC
GACCGGAATG TGCGGGCTCG TGCGCTCGGT CTTGGTGACT TGAAGTTTAC AGGTCAAATC
TTGCCGCACG CCCGCAAGAT ATCCTACACG GTCGATATCA AGCGGGTGAT GCGTTCGAAG
CTGGTGATGG CGATTGCCGA CGGTACAGTC AGCGTCGACG GCGATACGAT TTATCATGCC
AAGGATCTTC GGCTCGGCCT GTTCAAGAGC CTGCCCGGAT CACCGATTGA GCCGACAAGC
TGA
 
Protein sequence
MPNLRSSYDY EDLLACGRGE MFGPGEPKLP LPPMLMFDRI TEITEGGGKY GRGLVRTELD 
IKPNLWFFQC HFQNDPVMPG CLGLDGLWQM VGFYLVWLGR DRNVRARALG LGDLKFTGQI
LPHARKISYT VDIKRVMRSK LVMAIADGTV SVDGDTIYHA KDLRLGLFKS LPGSPIEPTS