Gene Nwi_1218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1218 
Symbol 
ID3675677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1339417 
End bp1339956 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content56% 
IMG OID637712768 
Producttripartite ATP-independent periplasmic transporter, DctQ component 
Protein accessionYP_317832 
Protein GI75675411 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTGT TACTGGCCCT CAGCACAGCC ATCGACCGGC TCAACGAAAA GGTCGGGTAC 
GTATGCAACA TCCTTGTGCT GCTTGCCGTG CTGGTGAGCG CCGGCAATGC AATGATCCGA
TATGCGTTCG GCTACAGTTC GAACAGCTGG CTCGAACTGC AATGGTACAT GTTCGCCATC
CTCGTGATGT TCGGCGCATC CTACACCTTC AAACGCAATG AACACGTTCG GGTCGAGATT
TTCTATCTGA TCCTGTCCGA TCGCGGCAGG CTCTGGCTGG ATCTCATCGG GACCCTCTTC
TTTCTCATTC CTGCCTGCCT GTTGCTCAGC TACCTGTCCT GGCCTTTCTT CATGCAGTCT
TATGCAATCG GCGAAGTATC CGGAAATGCC GGCGGTCTCG TTCGCTGGCC GATCAAGCTC
GTCGTCCCGC TCGGATTCGT CATGCTCGCG ATTCAGGGGA TCTCGGAAGT GATCAAGCGG
ATAGCGGCGC TACAGGGCCT TGTCACGATC CAGGCAACCT ACGAGAGACC GACTCAATGA
 
Protein sequence
MRLLLALSTA IDRLNEKVGY VCNILVLLAV LVSAGNAMIR YAFGYSSNSW LELQWYMFAI 
LVMFGASYTF KRNEHVRVEI FYLILSDRGR LWLDLIGTLF FLIPACLLLS YLSWPFFMQS
YAIGEVSGNA GGLVRWPIKL VVPLGFVMLA IQGISEVIKR IAALQGLVTI QATYERPTQ