Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_0093 |
Symbol | holA |
ID | 3674852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | + |
Start bp | 110384 |
End bp | 111412 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637711629 |
Product | DNA polymerase III subunit delta |
Protein accession | YP_316713 |
Protein GI | 75674292 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1466] DNA polymerase III, delta subunit |
TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.194892 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGCGC TGCGCGGAAA GGACATCGAC GGCTTTCTCG CCCGGCCCGA TCCGGCCCGG CCGATCATCC TGCTCTACGG TCCCGACGCC GGCCTGGTGC GCGAGCGCGC CAACGCGCTG ATAAGCTCGG CCGTCGAGGA TCCGAACGAT CCGTTTTCGT TAGTCCGGCT CGACGGCGAC GATCTCGCCG CCGAGCCCTC GCGTCTGGTC GACGAGGCGA TGACGGTGCC GCTGTTGGGC GGCCGCCGCG CCATCCGGAT CAAGGCGGGG TCACGCAGCT TCGCGAGCGG CGTCGATACG CTGGCGAATT CCACCATCCA GGATTGCCGG ATCGTGATCG AGGCCGGCGA ACTGAGGCCG GAATCGCCGC TGCGCAAGGC CTGCGAGCGG GCGAAGAACG CGGTGGCGAT CGCCTGCTAT CCCGACACCG AACGCGATCT GGCGCGGCTG ATCGACGAGG AGTTGCGCGC CTCCGACCTG AAGATCGCGC CCGACGCCCG CGCGGCGCTG ATGTCGCTGC TCGGCGGCGA CCGTCAGGCC TCGCGCAACG AACTGCGCAA GATCGCCCTC TATGCCCATG GACAAGGCGA GATCACGCTC CTCGATGTCA TGGCCGTGGT CTCCGACGCA TCCGACTTCA AGCTCGATCC CGTCATCGAC GCCGCCTTCG CCGGCCGGCC GGCGGCGGTC GAAGCCGAAT TCGCCAAGGC CATGGTCGCG GGCACCTATC CGGGCCTCGT CATCTCGGCC GCGCAGCGTT TTGTCGCCGC CCTGCACAAG GCCGCGCTTT TGATGGAAGA AGGCGCGTCG GCCTCATCAG CCACTGAGCG CGGATTTCCG CGCCTGCATT TTTCGCGCAA GGCGTCCGTG GAAACGGCGT TGAGCCATTT CAGCGCCCCG CGGCTGGTTC AGGTGATGGA CCAGCTCGCC CGCGCCGCAT TGGAAACCCG CAAGCAGGCA GCGCTGGCGT CGGCGATCAC GCAGCGCGCC CTGATGTCGA TCGCGGTGAA TGCGCGGCGG AGAGGATAG
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Protein sequence | MVALRGKDID GFLARPDPAR PIILLYGPDA GLVRERANAL ISSAVEDPND PFSLVRLDGD DLAAEPSRLV DEAMTVPLLG GRRAIRIKAG SRSFASGVDT LANSTIQDCR IVIEAGELRP ESPLRKACER AKNAVAIACY PDTERDLARL IDEELRASDL KIAPDARAAL MSLLGGDRQA SRNELRKIAL YAHGQGEITL LDVMAVVSDA SDFKLDPVID AAFAGRPAAV EAEFAKAMVA GTYPGLVISA AQRFVAALHK AALLMEEGAS ASSATERGFP RLHFSRKASV ETALSHFSAP RLVQVMDQLA RAALETRKQA ALASAITQRA LMSIAVNARR RG
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