Gene Nwi_0086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0086 
Symbol 
ID3675051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp103274 
End bp103756 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content66% 
IMG OID637711622 
Productcyclic nucleotide-binding protein 
Protein accessionYP_316706 
Protein GI75674285 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.929528 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0740226 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGGG ATGGATCATC GAACCGGTTT TGCATGTCGA TCGACGATGA CGTTGTCCTG 
CTCGAGCGCG TCCCGACCCT GCGCCTGCTG GGCGCGGAGG CCCTGCGCGT GCTTGCCATC
GGCGCCGAGC AGCAGCAGTT CGCCAGCGGG TCGATCCTGT TCCGCGCCGG TGACGAGGCG
GACGGCGGGT ATGTGGTTCA GGAAGGCGGC TTCCGCATCC ACGTCCCGAA CGGCCGCGAT
CGGAAAGTTG TCGCCGAGCG CGGCACGCTG ATCGGCGAAC TGGCCCTGAT CGTGCCGATA
TCACGGCCGG CCACCGCGAT CGCGCGTGAA TACTCGATGG TCATCCGCAT TCCGCGCACC
CTGTTTCTGC GCGTGCTCGA CAGCTATCCC GCCGCCGCCC AGCGCCTTCG CGATGAATTC
GCCAATCGCA CCCGGCAAAC GACCAGCGAC ATCCTGATGG CGTCGGCGAA GCTGAGCAGC
TGA
 
Protein sequence
MIRDGSSNRF CMSIDDDVVL LERVPTLRLL GAEALRVLAI GAEQQQFASG SILFRAGDEA 
DGGYVVQEGG FRIHVPNGRD RKVVAERGTL IGELALIVPI SRPATAIARE YSMVIRIPRT
LFLRVLDSYP AAAQRLRDEF ANRTRQTTSD ILMASAKLSS