Gene Nwi_0084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0084 
Symbol 
ID3674851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp101475 
End bp102251 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content64% 
IMG OID637711620 
ProductOuter membrane lipoprotein carrier protein LolA 
Protein accessionYP_316704 
Protein GI75674283 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2834] Outer membrane lipoprotein-sorting protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0818275 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGAC TCGCCGCGGC GCTGACCGCG AGCCTTTTTG TTCCGCCCGC CCTCGCCGAA 
ACCGTGCCGA TCCCGCAACC GGCGCCCGAG GTTCTTCGCG CCGCGGAGCC CGCGATTCTG
CTGGCTCAGG CCGGCAAGCT TGAGGTCACG GGAACCACGC GGCCGCCCGA CCCGATCATT
CCCGACCCCC GCCGCAACGT ACCGGCCAGT ATTTTCGCGA CTTTCGACGC GAATCAGAAG
GCGGCGGCGG CCCGGGTCAG CAGCTACCTG TCGTCGCTGC GGACGCTTGC CGGAAAGTTC
GTGCAGGTAG GTCCTGACGG CAGCCGCTCG ACCGGCGAAT TCTACATCCA GAAACCGGGC
AAGGTACGGT TCGAATACGA TCCTCCGTCG CCGATCGCGA TGATCTCCGA CGGCTCGTCG
CTCGTCATTC GCGACACCAG GCTAGCGACG CAGGATGTGT ACCCGCTGTC GCAAACGCCG
CTGCGCTATC TGTTGTCGGA CCGGATCGAC CTGATGAGAG ACACCAACGT CGTCGCCGTG
ACGTCGGACG ATCTCTACAT CAGCGTCATC ATCGAGGAGA AGCAGGCGCT GGTCGGCACC
TCCCGCCTCA TGTTCATGGT CGGCGTCAAG GACGGCAAGC TCAAGCAGTG GACCATCACC
GATCCGCAAG GTTACGACAC CACGGTGGCG ATCTACAATC TGAACCCGAC GGCGAAGCTC
GATCCCGCGC TGTTCAGAAT CAACGGCACC ATGCATCCGG CATCGACCAA CAATTGA
 
Protein sequence
MAGLAAALTA SLFVPPALAE TVPIPQPAPE VLRAAEPAIL LAQAGKLEVT GTTRPPDPII 
PDPRRNVPAS IFATFDANQK AAAARVSSYL SSLRTLAGKF VQVGPDGSRS TGEFYIQKPG
KVRFEYDPPS PIAMISDGSS LVIRDTRLAT QDVYPLSQTP LRYLLSDRID LMRDTNVVAV
TSDDLYISVI IEEKQALVGT SRLMFMVGVK DGKLKQWTIT DPQGYDTTVA IYNLNPTAKL
DPALFRINGT MHPASTNN