| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_0054 |
|---|
| Symbol | trpA |
|---|
| ID | 3676493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | - |
|---|
| Start bp | 66066 |
|---|
| End bp | 66902 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637711589 |
|---|
| Product | tryptophan synthase subunit alpha |
|---|
| Protein accession | YP_316674 |
|---|
| Protein GI | 75674253 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0159] Tryptophan synthase alpha chain |
|---|
| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.130781 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACAACCC GTATCGACAC GCGCTTCGCC GAGTTGCGCA AGCAGGGACG CTCGGCCTTC
GTCACTTTTC TGATGGCCGG CGATCCGGAC CCCGCGACCT CGCTCGCCAT CATCAAGGCG
TTGCCCAGGG CCGGCGCCGA CATCATCGAA ATCGGAATGC CCTTCACCGA TCCGATGGCG
GATGGTCCGG CGGTCCAGGC GGCCGGGCGG CGCGCGCTCG ATGCGGGCAT GACCCTGACC
GGCACGCTGC GGATGATCGG CGAGTTTCGG AAGGACGACG ATTCGACGCC GGTCGTGCTG
ATGGGCTATT ACAATCCGGT CTACATCTAC GGCGTCGAGA AATTTCTTGA CGATGCCAGG
GCGGCGGGCG TCGATGGCCT GATCGTCGTC GACCTGCCGC CGGAGGAAGA CTCCGAGTTG
TGCATCCCGG CGATGAAAGC CGGATTGAAT TTCATTCGCC TGGCGACGCC GACGACGGAT
GACAAGCGTC TGCCGGCGGT GCTCGCGAAT ACGTCGGGTT TTGTGTACTA CGTCTCGATC
ACCGGGATCA CCGGCAGCGC GGCGGCGGAT TCGACGGCGG TTGGCGCGGC GGTCGGGCGC
ATCAAGCGCC ATACGAGCCT GCCGGTCTGC GTCGGCTTCG GCATCCGCAC TCCGGATGCC
GCGCGCGGCA TTGCCGAGCG CTCGGACGGC GCGGTGGTCG GCTCGGCGCT GGTCGATGCG
CTCAGCGCCA GCCTCGACGC CGAAGGCAAG GCGACGTCCG GAACCGTCCA GGCGGTCGCC
TCTCTCGCGG CGGCGCTGGC CGAGGGCGTG CGGTCGGCGC GGCAAGCAGC GGAATAG
|
|---|
| Protein sequence | MTTRIDTRFA ELRKQGRSAF VTFLMAGDPD PATSLAIIKA LPRAGADIIE IGMPFTDPMA
DGPAVQAAGR RALDAGMTLT GTLRMIGEFR KDDDSTPVVL MGYYNPVYIY GVEKFLDDAR
AAGVDGLIVV DLPPEEDSEL CIPAMKAGLN FIRLATPTTD DKRLPAVLAN TSGFVYYVSI
TGITGSAAAD STAVGAAVGR IKRHTSLPVC VGFGIRTPDA ARGIAERSDG AVVGSALVDA
LSASLDAEGK ATSGTVQAVA SLAAALAEGV RSARQAAE
|
|---|
| |