Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_0049 |
Symbol | |
ID | 3676488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | + |
Start bp | 56100 |
End bp | 59261 |
Gene Length | 3162 bp |
Protein Length | 1053 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637711584 |
Product | hypothetical protein |
Protein accession | YP_316669 |
Protein GI | 75674248 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3893] Inactivated superfamily I helicase |
TIGRFAM ID | [TIGR02786] double-strand break repair protein AddB, alphaproteobacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.258638 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.374652 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGTCC GCAACGTCCC CTCCTCAGTG CCGTTTCTGC GCGCGGTCAT CACCGCGCTG GTCGACGGGG AGCTGATCGA GGGATTCCGT CCGCGCGCGC AGCCCGAACG GCTTGCCGAA GCCACGCTCT ATCTGCCGAC CCGCCGCGCC GGCCGCATGG CGCGCGATAT TTTCCTCGAC GTGCTGGATA CCGACGCCGT GATCCTGCCG CGCATCGTCG CGCTCGGCGG AATCGACGAG GACGAACTGG CTTTCGCGCA GGCCGTCTCG TTGCCGCCGG AGACGCTCGA ACTGCCGCCG GCGCTGGACG GGCTCGCGCG CCGCCTCGCG CTCGCCCAGC TTATCGACGC ATGGGCGCGG CGGCTGAATC TCGGTGACGG CGAGCCAGCG CGGGCCCCGC TGGTGCTCGG CGGTCCGGCC TCGACGCTGA CGCTTGCCGC CGATCTCGCG CGACTGATGG ACGACATGGC CACGCGCGGC GTGGACTGGC GCGCGCTCGA CGGGCTGGTG CCCGAGGCGC TCGACCGCTA CTGGCAGATC ACGCTCGATT TCCTGAAGAT CGCGCGCGAC TACTGGCCGG CTCACCTTCA GGAAACCGGC CGGATCGAAC CCGCGGCGCG GCGCGACCGC CTGATCGAAG CCGAAGCCGC GCGTCTCGCC GCCCATCATG TGGGACCGGT GATCGCGGCG GGCTCCACCG GCTCGATGCC GTCGACCGCG AAACTGCTGC ACGCCATCGC CACGCTGCCG CAAGGCGCGG TCGTGCTGCC AGGACTCGAC ACCGACCTCG ATGAAGAGGC GTGGAGGTTG ATCGGCGGCG TCAGGGATAA AGCGAGCGGC GCGTTCATCA CGCCGCCCGC CGCCGGTCAT CCGCAGTTCG CGCTGCACGG CCTGCTCGCG CGCTTCGGCA TCAAACGATC GGAGGTGAAA GCGCTCGGCT TCCCCGCGCC ATACGGGCGC GAAATGCTGG CGTCCGAGGC GATGCGGCCC GCGGAGGCGA CCGCGCAATG GCATACCCGG CTCGCCGAAC CCGAGGTCGC GGATAAGATC GCGGCCGGAC TGCAAAATCT CGCCGTGATC GCGGCCGCCA ATCCGGAAAT GGAAGCGCTC GGCATCGCCG TCGCCATGCG CGAGGCGCGC GACCTGAACA AGACCGCGGC GCTGGTGACG TTCGACCGCG CGCTGGCGCG GCGGGTGATG GCGGCGCTCG GCCGCTGGAA TCTCGCCTTC GACGATTCGG GCGGCGATCC GCTGATGGAC ACGCCTGCTG GAATCTTCGC ACGGCTGGCC GCCGAGACCG CGTGCAACGG TCTGGAGCCC CCGACCCTGC TGGCCTTGCT GAAGCATCCG CTGTGCCGGT TGGGACGCGC GGCGGGCGGC TGGTCGCGTG CCATCATAGC GCTGGAGCTT GCGATCCTGC GAGGCCCCCG GCCGCCGCCG GGCGGCAAGG GCCTCGCGGA CGAATTCGCG CGCTTTTGCG ATGAGCGCGA CCAGCTCGAT CGCGGCGAGA GTTCCTCGTT GCATCGCAGC GAGCCCCGCG CGGCGCTGAA ACCGGACCAT CTCGACGATA TCAGCGCCCT GATCGCGGCC CTGCGGGATG CGCTCGCGCC GCTCGAAGGC GACGGCGCAT CGAGATCGGC GGACTTCACC CTCCTCGCCC TGCAGCATCG CCAGACTATC GAATCGTTAT CCTGTGACGA TGAAGGCGTC GCCGTCGCAT TCGACGGCCG GCACGGCCGT GCCCTCGCTG ATGCTTTCGA CGATCTGGTT GATGCGGGTG AGCGCAGCGG CCTGACGGTC AGGATCGCGG ACTATCCGGA AACCTTCGAG GCCGCGTTCG GCGATCGCGT GGTGCGCCGG CCGCAGGCGA CATCGGCAAG CCTGCGCATC TACGGACCGC TCGAAGCGCG TCTGACCCAA TGCGACCGCG TCATCCTCGG CGGGCTCACC GAAGGCGTCT GGCCGCCCGC GCCGCCGACC GATCCCTGGC TCAGCCGGCC GATGCGGCAC GAACTGGGGC TCGATCTTCC GGAACGGCGC ATCGGACTGT CCGCGCACGA TTTCACGCAA CTGTTCGGCG CCGAGGAGGT CATCCTCAGC CATGCCGCCA AGGCCGCAGG CGCGCCGGCG GTGGCGTCCC GTTTCCTGCA TCGGCTCGAA GCCGTCGCGG GCGCGACACG CTGGACATCG GCGAAACAAG CCGGCGCGCG ATATATTCAG TATGCCGAAG CGCTCGATCG GCCCAGCGAG GTTACACCGA TCGCGCAGCC CGCGCCGAAG CCGCCGCGCA CGGCGCGGCC GACGCGCCTG TCCGTGACCG CGATCGAGGA CTGGCTGCGC GATCCCTACA CCATCTACGC CAGATACATC TTGAAGCTGC TGCCGCTGGA GGCCGTCGAC ATGCCCTTGT CGGCGGCAGA CCGCGGCTCG GCGATTCACG ACGCGCTCGG CGACTTCACC AAACGTTATC CGGCAAGCCT GCCCGACGAT CCGGAAGACG TGCTGCGCGC CATCGGCGAA AGCCGTTTCG CGCCGCTGAT GCAGCGGCCG GAAGCGCGCG CGCTGTGGTG GCCGCGCTTC CAGCGCATCG CGGCATGGTT CGCGGAATGG GAGCCGACGC GGCGGGCGCA TCTGGTCAGG ATCGACGCCG AGGTCAGCGG AAAAATCGAA ATCCCGATCG ACGGCGATCG CAGGTTCACT CTGTCGGCGC GCGCCGACCG TATCGAACAT CTCGGCGGCG GCCGCTTCGC CGTTCTCGAC TACAAGACCG GCAGTCCTCC GAGCAGCAAG CAGGTGCGGC TCGGCCTGTC GCCGCAGCTC ACGCTGGAAT CCGCGATCCT GCGCAACGGC GGCTTCGCGG GCATTCCCCC CGGCGCATCG GTCAGCGAGC TGGTCTATGT CCGGCTCAGC GGCAACAATC CTGCCGGCGA ACCGAGACCG GTCGATCTCG ATAACGGCAA AACCGCAACC CGGTCGCCCG ATCAGGCGGC CGATGTCGCG CTTGAAGAAC TCACCGCGCT GATCCGTGCC TTCGACGACG AGCAGCAGGG CTACGCATCG CTCGACCTGC CGATGTGGAA GGCCCGCTAC GGGGTCTATG ACGATCTCGC ACGGATCAAG GAATGGTCGG CGGCGGGCGG GCCGGGGTCG GAGGAATGGT GA
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Protein sequence | MRVRNVPSSV PFLRAVITAL VDGELIEGFR PRAQPERLAE ATLYLPTRRA GRMARDIFLD VLDTDAVILP RIVALGGIDE DELAFAQAVS LPPETLELPP ALDGLARRLA LAQLIDAWAR RLNLGDGEPA RAPLVLGGPA STLTLAADLA RLMDDMATRG VDWRALDGLV PEALDRYWQI TLDFLKIARD YWPAHLQETG RIEPAARRDR LIEAEAARLA AHHVGPVIAA GSTGSMPSTA KLLHAIATLP QGAVVLPGLD TDLDEEAWRL IGGVRDKASG AFITPPAAGH PQFALHGLLA RFGIKRSEVK ALGFPAPYGR EMLASEAMRP AEATAQWHTR LAEPEVADKI AAGLQNLAVI AAANPEMEAL GIAVAMREAR DLNKTAALVT FDRALARRVM AALGRWNLAF DDSGGDPLMD TPAGIFARLA AETACNGLEP PTLLALLKHP LCRLGRAAGG WSRAIIALEL AILRGPRPPP GGKGLADEFA RFCDERDQLD RGESSSLHRS EPRAALKPDH LDDISALIAA LRDALAPLEG DGASRSADFT LLALQHRQTI ESLSCDDEGV AVAFDGRHGR ALADAFDDLV DAGERSGLTV RIADYPETFE AAFGDRVVRR PQATSASLRI YGPLEARLTQ CDRVILGGLT EGVWPPAPPT DPWLSRPMRH ELGLDLPERR IGLSAHDFTQ LFGAEEVILS HAAKAAGAPA VASRFLHRLE AVAGATRWTS AKQAGARYIQ YAEALDRPSE VTPIAQPAPK PPRTARPTRL SVTAIEDWLR DPYTIYARYI LKLLPLEAVD MPLSAADRGS AIHDALGDFT KRYPASLPDD PEDVLRAIGE SRFAPLMQRP EARALWWPRF QRIAAWFAEW EPTRRAHLVR IDAEVSGKIE IPIDGDRRFT LSARADRIEH LGGGRFAVLD YKTGSPPSSK QVRLGLSPQL TLESAILRNG GFAGIPPGAS VSELVYVRLS GNNPAGEPRP VDLDNGKTAT RSPDQAADVA LEELTALIRA FDDEQQGYAS LDLPMWKARY GVYDDLARIK EWSAAGGPGS EEW
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