Gene Nwi_0034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0034 
Symbol 
ID3675157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp38590 
End bp39114 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content61% 
IMG OID637711569 
Product3-hydroxydecanoyl-(acyl carrier protein) dehydratase 
Protein accessionYP_316654 
Protein GI75674233 
COG category[I] Lipid transport and metabolism 
COG ID[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 
TIGRFAM ID[TIGR01749] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.234021 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGACC GGCGCAGCAG CTATGATTAT GAGGGTTTGC TGGCGTGCGG CCGGGGGGAA 
CTGTTCGGAC CGGGAAACGC CCAGTTGCCG TTGCCGCCGA TGCTGATGTT CGATCGTATC
ACCGATATAA ACGAGGATGG CGGGGAGTTT GGAAAAGGAT TGATCCGCGC CGAACTCGAC
GTCAAACCCG ATCTCTGGTT TTTCGGCTGC CATTTCAAGG GCGATCCGGT GATGCCCGGC
TGCCTCGGCC TCGATGCGCT ATGGCAGATG GTCGGATTTT TCCTCGGTTG GACCGGGGGC
GAAGGCCGGG GCCGGGCGCT CGGCTTAGGC GAGCTGAAGT TCACCGGCCA GGTGCTGCCG
CCCGTTCGCA AGGTCGTATA TAATGTCGAC ATCAAGCGGG TGATGCGCTC GAAGCTGGTG
CTCGGGATCG CGGACGGGTG GCTTTCCGCC GACGATGATA TTATTTACCG CGCGAAAGAC
CTGAAGGTCG GTCTGTTCAA GCAGGATGCA GGGCCGGGGG CCTGA
 
Protein sequence
MQDRRSSYDY EGLLACGRGE LFGPGNAQLP LPPMLMFDRI TDINEDGGEF GKGLIRAELD 
VKPDLWFFGC HFKGDPVMPG CLGLDALWQM VGFFLGWTGG EGRGRALGLG ELKFTGQVLP
PVRKVVYNVD IKRVMRSKLV LGIADGWLSA DDDIIYRAKD LKVGLFKQDA GPGA