Gene Nther_1164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1164 
Symbol 
ID6315646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1232471 
End bp1233340 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content32% 
IMG OID642643537 
ProductUbiA prenyltransferase 
Protein accessionYP_001917335 
Protein GI188585790 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1575] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 
TIGRFAM ID[TIGR00751] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.000708526 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAATCAA CATTATATTT CAGAGCTTTA AGACCTTTTT CTTTCCCTAC CTCTATTATT 
CCTATTACAA TAGGTACTTT CTGGGAGATA GGAAGTGGTG TTAATTGGCC AATTTATTTG
ATAACTTTAT TATGCGGGAT AGCTATACAT GGTGGTACTA ATTTAACTAA CGATTATTAT
GATTTTATAC GAGGAGTAGA TACTGTAAAT TCCTTTGGGT CAAGTAAACT TTTGCCATTA
CAAATTATTC CTCCCAGAAA CATATTAATA TTCGCAGTTA TGTCTTTTAG TTTTGCATTT
ATTCTTAGTC TAATTCTTGG TATATTAACT TCATATAAAG TAACTGTTAT TGCTGTCATA
GGAATTCTAG CTGGTTATTT TTATACAGGG TTTCCGTTAC AACTGAAATA TCGGGCTTTA
GGTCCAGTTC TAGTTTTTTT AATGATGGGC CCATTGTTAG TAAAAGCTGG GGGTTTGACA
CAACTGGGTT ATTCAGATTG GGATTTAATT TTGATTAGTA TTCCCATTGC ATGTTTAGTA
TCTATTATTT TACAAGCGAA TGATCTGAGG GATAAAAGAT GGGATAAAAG AAGTGGTGTA
ACTACTTTTG CTATTTTGTT TGGCTACTCA ATGGCATGTA AAATTTTTAC AATAACTGGA
TTGGTAGCTT TTTTACTAAT CCCCATATTC GTCAGTCAAG GATTACTTCC ATATTTTACA
ATGATTACAT GGTTGTTACT GCCTAAATTT TTTGCAGTTA ATCGCAAAAT TTACAAGGGG
ACTTCCTCTC TTATGTTGAA TATTGATATA GAGATGACTA AACTATATTC CCTGTTTGGT
GTAATAATTA TATTTTCCAT ATTAATATAG
 
Protein sequence
MKSTLYFRAL RPFSFPTSII PITIGTFWEI GSGVNWPIYL ITLLCGIAIH GGTNLTNDYY 
DFIRGVDTVN SFGSSKLLPL QIIPPRNILI FAVMSFSFAF ILSLILGILT SYKVTVIAVI
GILAGYFYTG FPLQLKYRAL GPVLVFLMMG PLLVKAGGLT QLGYSDWDLI LISIPIACLV
SIILQANDLR DKRWDKRSGV TTFAILFGYS MACKIFTITG LVAFLLIPIF VSQGLLPYFT
MITWLLLPKF FAVNRKIYKG TSSLMLNIDI EMTKLYSLFG VIIIFSILI