Gene Noca_1754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_1754 
Symbol 
ID4597936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp1865093 
End bp1866277 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content71% 
IMG OID639776354 
Productglycosyl transferase family protein 
Protein accessionYP_922954 
Protein GI119715989 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGGGAGT ACCTCCTCGT CTTCCTCGTC GCGGCCGCGA CGACGTACCT CCTCACGGTC 
ATCGCGCGCG AGATCGCCCT CCGCACCGGC GCGGTCGCGA AGGTCCGGGA CCGCGACGTG
CACGCCGTGC CGATCCCGTA CCTCGGCGGG CTCGCGATGC TGGGTGGCCT GGTGGCGGCG
TACCTCGTGG CGCGGCAGCT GCCGTTCCTC TCCAAGAGCG GAGCGTTCGT CTTCCACGAT
GCCGGCATCG TGCTGATCGC GGGCGCGCTC ATCTGTGCAG TGGGCGTGCT CGACGACCTC
TTCGAGCTCG ACGCCCTGAC CAAGCTCGGC GGCCAGGTGC TCGCCGCGGG CTTCCTCATC
GCGTTCGGGA TCCAGTACAT CTTCTTCCCG GGTGGCGACG GGGTACAGGT CAGCATCGAC
CAGAGCCAGG GCGCGCTGCT GACCGGGTTC ATCGTCGTCG CGACCGTGAA CGCGGTGAAC
TTCGTCGACG GCCTGGACGG CCTGGCCACC GGTGTGGTCG GGATGGGGGC GCTCGCGTTC
TTCGTCTACT GCTACCAGCT CGCGAACATC AACAACGTGA CGCTGGCGAC GACCGGGGCG
CTGCTGAGCG CCTCGCTCGC CGGCGCGTGC GCCGGCTTCC TGCCCCACAA CTTCCACCCG
GCGCGGCTGT TCATGGGGGA CAGCGGCTCG ATGTTGCTCG GTCTGGTGCT CTCCGCGAGC
GCGGTCACCC TGACCGGGCA GTTCGACCCC GAGCAGATCA GCGCGGGTGC GGCGGGCTCG
CGGGCCAGCT TCGTGCCGAC GCTGCTGCCC CTGCTGCTGC CCGTCTCGCT CCTGGTCGTG
CCGATGCTCG ACCTGGTGCT CGCCGTCGTC CGCCGCACCC GCGCCGGCCG GTCGCCGTTC
GCCCCGGACA AGCAGCACCT GCACCACCGG CTGCTCGAGA TCGGGCACTC GCACCGGCGC
GCGGTCCTGA TCATGTGGAT GTGGGCCGCG CTGGTGGCCT TCGGCACCGT CTTGATCAGC
CTCTACAGCG CCGACGCGTG GATGTGGTCG TCGGTCTCGG CGATGGCGGC GCTGACGGTC
GGGGTGACCT TCGTGCTGCC CAAGCTGCGC CGGACCCAGC TCGTCACCGA CGCCGGGGTC
GCCGACGCCG GGCACACCGA AGGTGGGGCC GCCGACGCGT CCTAG
 
Protein sequence
MREYLLVFLV AAATTYLLTV IAREIALRTG AVAKVRDRDV HAVPIPYLGG LAMLGGLVAA 
YLVARQLPFL SKSGAFVFHD AGIVLIAGAL ICAVGVLDDL FELDALTKLG GQVLAAGFLI
AFGIQYIFFP GGDGVQVSID QSQGALLTGF IVVATVNAVN FVDGLDGLAT GVVGMGALAF
FVYCYQLANI NNVTLATTGA LLSASLAGAC AGFLPHNFHP ARLFMGDSGS MLLGLVLSAS
AVTLTGQFDP EQISAGAAGS RASFVPTLLP LLLPVSLLVV PMLDLVLAVV RRTRAGRSPF
APDKQHLHHR LLEIGHSHRR AVLIMWMWAA LVAFGTVLIS LYSADAWMWS SVSAMAALTV
GVTFVLPKLR RTQLVTDAGV ADAGHTEGGA ADAS