| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0754 |
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| Symbol | |
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| ID | 4599639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 800416 |
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| End bp | 801291 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 639775355 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_921966 |
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| Protein GI | 119715001 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins)
[COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.970703 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCAGG TCGCCCCGTC CAGCGCTGCC GGAGCCCTCG GCACGCCCGG CACGGCGAGC
GGGGATGCCG TCGTCGCGGC AGCGAAGAAG TACCTCGGCG TCCCCTACGT GTGGGGCGGC
ACCGACCCTG CGAAGGGCCT GGACTGCTCG GGCCTCGTGC AGCGCGCCTA CCGGGACCTC
GGCTACGAGC TGCCCCGCGT CTCCTATCAG CAGGCCGAGG CCGGTCGACC CGTGAGCGGC
GGCCTCGCCA ACGCACAGCC CGGCGACATC CTCGCCTTCG GCTCTCCGGT CCACCATGTC
GGCATCTACG TGGGCGACAA CCAGATGATC GAGGCACCCC GGCCCGGGCT GGACGTGCGG
ATCGGCCCGG TCTACGAGAC GCCGACCGCG ATCCGGCGGG TGGTCCCCGA CGCCGGCGCG
ATCGCACCGG TCACCCCGGC CGGGGGCGTC GTCGCCGGCC CGGTGGCGGC CGGCGCCGCG
GCCCGCCTGG CGCCCGGGAC GCCGTACGCG TCCCTGTTCG AGTCCGCCGC CCAGAAGTAC
GGCGTCAGCC CCGCGCTGCT GTCCGCCGTC GCCCGCCAGG AGTCCGGCTA CAACCCGCGC
GCCACCAGCC CGGCCGGCGC GCAAGGGCTG ATGCAGCTGA TGCCCGGCAC CGCCTCCGGG
CTCGGGGTCG ACAACCCCTA CGACCCGACC CAGGCTGTCG ACGGCGCCGC CCGGCTGCTC
AGCAGCCTGC TCGACCGCTT CGGGAGCACG CCGCTCGCGC TCGCCGCCTA CAACGCCGGC
CCGGGGGCCG TGCTCCGGTA CGGCGGGGTC CCGCCCTACC CCGAGACCAA GAACTACGTC
CGTTCCGTGA TGTCGATGCT GGGAGCCGCC GCATGA
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| Protein sequence | MRQVAPSSAA GALGTPGTAS GDAVVAAAKK YLGVPYVWGG TDPAKGLDCS GLVQRAYRDL
GYELPRVSYQ QAEAGRPVSG GLANAQPGDI LAFGSPVHHV GIYVGDNQMI EAPRPGLDVR
IGPVYETPTA IRRVVPDAGA IAPVTPAGGV VAGPVAAGAA ARLAPGTPYA SLFESAAQKY
GVSPALLSAV ARQESGYNPR ATSPAGAQGL MQLMPGTASG LGVDNPYDPT QAVDGAARLL
SSLLDRFGST PLALAAYNAG PGAVLRYGGV PPYPETKNYV RSVMSMLGAA A
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