| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0098 |
|---|
| Symbol | |
|---|
| ID | 4600071 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 110420 |
|---|
| End bp | 111496 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 639774708 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_921330 |
|---|
| Protein GI | 119714365 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3535] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCCTC CGGCTTCCCG GACCCTGCGC GCGGCCGACC TCGAGGCGCT GGCGGTCGGC
CTGTGCCTGC TGGGCTCGGG CGGCGCCGGC GACCCGCAGC CCTTCGCCTC CGTGCTGCGC
TCGCAGCTCG GTAACGGCGA GCTGGTGCTG CACGCACCCG GCGGTCTCGG GGGCGCGAGC
GTCGTGCCGG TGGGGATGGT GGGGGCCACC AGCGTGTTCA CCGAGAAGCT GCCCCACGGC
GGTGAGTTCG GCGCGGCCGT CGCCGCGACC GGACGGTGGA CCGGCGCGGC CCCGGACGCG
GTGATGGGGA TCGAGACGGC CGGCCTGAAC GGCGTCACCG CGCTGGTGGC CGCGCTGCGC
ATGGGGCTGC CGTACGTCGA CGCGGACCTG GCCGGACGCG GGCTGCCCCG GCTCGACCAG
CTGACCTGGG TGACCGCGCA GCTGCCCCTG ACCCCGTGCG CCCTCGCGTT CCCGGGCGGC
CACACCTTGC TCGTCGACAG CGCCTCCGCC ACCGAGGTGG AGAGGACGAT CCGGGCCGCG
CTGGCGGGAA CCGGCGGCTG GGCGGCCCTC GCGCTCCCGC CGAGCCCCGC CGCCCTGCTG
GACGAGACGG CCTGCGTGGG GACCCTGGGC CGGGCGCTCG AGCTCGGGCG CGCGCACGAC
TCGCTGCGCG TGCTGGCGGA CGCCGCGGAG GTCGCGGAGG TGCTGGGGGG CGAGGTCCTC
GGCGAGGGCC GCGTGCACGA CGTGCTGCGG CACAGCGCGG GCGGCGGGCT GCAGCCCGAG
TCGTCGGTGA CGGTCCTCGA CCGGAACGGC CCCGTGCTGC GGATCGAGAC GGAGAACGAG
TTCTTGATGG TGCTCGTCGA CGGCGAGCCC CGGGCCACGG TCCCCGACCT CATCTGCCTG
CTGGACCGCC GGACGAACCG GCCGTTGGCG GTCGACGCCC TCCGGCGCGG CGACGAGGTG
TTCGTGGTGG TCCTGCCGGC TCCCGCGTGG TGGCTCGCAC CGGGCCGCCT CGACCGGGTG
TCGCCGGCCG CGTTCGCCAT CGACAGCCCG CCCCTGCTCC TGGGCGGGCG GCCGTGA
|
|---|
| Protein sequence | MSPPASRTLR AADLEALAVG LCLLGSGGAG DPQPFASVLR SQLGNGELVL HAPGGLGGAS
VVPVGMVGAT SVFTEKLPHG GEFGAAVAAT GRWTGAAPDA VMGIETAGLN GVTALVAALR
MGLPYVDADL AGRGLPRLDQ LTWVTAQLPL TPCALAFPGG HTLLVDSASA TEVERTIRAA
LAGTGGWAAL ALPPSPAALL DETACVGTLG RALELGRAHD SLRVLADAAE VAEVLGGEVL
GEGRVHDVLR HSAGGGLQPE SSVTVLDRNG PVLRIETENE FLMVLVDGEP RATVPDLICL
LDRRTNRPLA VDALRRGDEV FVVVLPAPAW WLAPGRLDRV SPAAFAIDSP PLLLGGRP
|
|---|
| |