| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0089 |
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| Symbol | |
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| ID | 4600062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 100572 |
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| End bp | 102200 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639774700 |
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| Product | delta-1-pyrroline-5-carboxylate dehydrogenase |
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| Protein accession | YP_921322 |
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| Protein GI | 119714357 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01236] delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.507481 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACGCTG TCACGACCCC TCCCGCTCCG ACCAACGAGC CGAACCTGAC CTACGCGCCC
GGCGCCCCCG AACGGGCCAC GCTGGTCGCT GAGATCGAGA AGCTGCAGAA GACGCAGAAG
ACCCTGCACG CCTACATCGG TGGCCGGTGG CGGGCCGGGG GTGGTGCGGA GATCCCGGTG
GTCCAGCCGC ACGATCACCA GCACGTGCTG GGCACGATGA AGAACTCCAC GCAGGCCGAC
GCCCGCGCCG CGATCACGGC CGCGTCCGAC GCGGCGCCCC AGTGGCGTGA CATGACGTTC
GACGACCGGG CGGCCGTCCT GCTCAAGGCG GCCGACCTCC TGGCCGGGCC GTGGCGTCAG
CGGCTCAACG CCGCGACCAT GCTCGGGCAG TCGAAGACGG CCTTCCAGGC GGAGATCGAC
AGCGCCTGCG AGCTGGTCGA CTTCTGGCGC TTCAACGTCC ACTACGCCAA GCAGATCCTC
ACCGACCAGC CGATCGCCAA CAGCCCGGGC GTGTGGAACC GCACCGACCA CCGCCCGCTC
GAGGGGTTCG TCTACGCGAT CACCCCGTTC AACTTCACCG CCATCGCCGG CAACCTGCCG
ACGGCGCCGG TGCTCATGGG CAACACGGTG CTCTGGAAAC CCTCCTCGAC CCAGCAGCTC
GCCGCGTCAC TGACGATGGA GCTGCTGGAG GAGGCCGGGA TGCCACCCGG CGTCATCAAC
ATGCTCCCCG GTGACGGGCT CGCGGTCTCC GAGGTCGCGC TCGCGCATCC CGACCTGGCC
GGCATCCACT TCACCGGCTC GACGCCGCTG TTCCAGCGTC TCTGGAAGAC CGTCGGCGAG
AACATCGCCC GATACCGCTC CTACCCCCGT CTCGTGGGCG AGACCGGCGG CAAGGACTTT
ATCGTCGCCC ATGCTTCGGC CGACCCGGAC GTGCTCCGCA CGGCGATGAT CCGCGGCGCG
TTCGAGTTCC AGGGCCAGAA GTGCTCGGCG GCGTCCCGGG CGTACGTCGC CCGGTCGGTC
TGGAACAAGA TGAAGGACTC GTTCCTGTCC GAGATCGAGT CGCTCACCGT GGGTGACCCG
ACCGACTTCT CCCACTTCAT GGGCGCCGTG ATCGACGACC GCGCCTTCGC CAGGCACCGG
GCCGCGATCG ACCGAGCGAA GCGCTCAGGC AAGCTCGACA TCCTGGCCGG CGGCACGCTC
GACGACACGG TCGGCTGGTT CGTCAGACCG ACCGCCATCG AGAGCGGCGA CCCGACCGAC
GAGATCTTCA CGACCGAGTA CTTCGGCCCG ATTCTCGCCG TTCACGTCTT CGACGACGGC
GACTTCGAGA AGGTCGTGCA CGCGATGGAG TCGAGCACGC CCTACGCGCT GACCGGCTCG
ATCATCGCCC GCGACCGCCG CACGATCGCG TGGGCCCAGG AGACGCTGCG GTTCGCTGCC
GGCAACTTCT ACGTCAACGA CAAGCCGACC GGCGCCGTCG TCGGTCAGCA GCCGTTCGGC
GGCGGCCGGG CGTCGGGCAC CAACGACAAG GCGGGGTCGG CCGCGAACCT GCTGCGTTGG
ACGTCCCCGC GGAGCATCAA GGAGACGTTC GACCCGCCGA CCGACTACCG CTACCCGCAC
CTCGGCTGA
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| Protein sequence | MDAVTTPPAP TNEPNLTYAP GAPERATLVA EIEKLQKTQK TLHAYIGGRW RAGGGAEIPV
VQPHDHQHVL GTMKNSTQAD ARAAITAASD AAPQWRDMTF DDRAAVLLKA ADLLAGPWRQ
RLNAATMLGQ SKTAFQAEID SACELVDFWR FNVHYAKQIL TDQPIANSPG VWNRTDHRPL
EGFVYAITPF NFTAIAGNLP TAPVLMGNTV LWKPSSTQQL AASLTMELLE EAGMPPGVIN
MLPGDGLAVS EVALAHPDLA GIHFTGSTPL FQRLWKTVGE NIARYRSYPR LVGETGGKDF
IVAHASADPD VLRTAMIRGA FEFQGQKCSA ASRAYVARSV WNKMKDSFLS EIESLTVGDP
TDFSHFMGAV IDDRAFARHR AAIDRAKRSG KLDILAGGTL DDTVGWFVRP TAIESGDPTD
EIFTTEYFGP ILAVHVFDDG DFEKVVHAME SSTPYALTGS IIARDRRTIA WAQETLRFAA
GNFYVNDKPT GAVVGQQPFG GGRASGTNDK AGSAANLLRW TSPRSIKETF DPPTDYRYPH
LG
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