| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_0078 |
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| Symbol | |
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| ID | 4600051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 87213 |
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| End bp | 88028 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639774689 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_921311 |
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| Protein GI | 119714346 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGCCCC CGCATGAGGC GCGCGGCGGG ACGCTCGAGG CCCGCACGGC GATTGTCACC
GGTGGCTCGA CCGGAATCGG GATGGCGACC GCGCGTTCGC TCGCCGGCCG GGGTGCCCAC
GTGGTCATCG CCGGCCGAGA TCGCGACCGC GGCACCAGGG CTGCGGCGAA TCTCGCCGCC
GGGACGCCCG GGACGGTCAC GTACGTCGAG CTGGACGTGC GGGAGGCCGA GTCGGTCGCC
GGGCTGGTCG CGACCACCGT CGAGACGTTC GGCTCGCTGG ACATCCTGGT CAACAACAGC
GGAGTCGAGG CGGAGGAGGG GCCCGACGGG CCGTCCGAAC CTGATTGGGA CCGGATGTTC
GCGACCAATG CTAAGGGCAC GTGGCTGTGC TGCCGCGCCG CGCTTCCACA CCTGGAGCGT
ACGCACGGGG TGATCGTCAA CAATGCCTCC ATGGCCGGCC TCATCGGTGT TGCCGGCGGA
GCGGGCTACG CGGCGTCGAA GGCCGCGGTG GTGAGCCTCA CCAAGTCCCT GGCGCTCGCC
TACGCCGAGC GAGGGGTCCG GGTCAACGCG GTGTGCGCCG GCCCGGTCGA CACCCAGATG
ACCTACGACG AGTGGGAGCT GGTCGGCGGT CCCGAGGAGG GACTGCGCCG TGCACTCGCG
CTGAGCCCGG CGCGGCGCAT CACGGCGCCG GAGGAGGTCG CCGAGCTCAT CTGCTTCCTG
GCGTCCGACG ACGCGGCGTC CATCACGGGG GCGGCGATAC CGATCGACGG CGGCAAGACG
GCGGGCCTGA TGCCGACGGA GCGGTACCGC TGGTGA
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| Protein sequence | MTPPHEARGG TLEARTAIVT GGSTGIGMAT ARSLAGRGAH VVIAGRDRDR GTRAAANLAA
GTPGTVTYVE LDVREAESVA GLVATTVETF GSLDILVNNS GVEAEEGPDG PSEPDWDRMF
ATNAKGTWLC CRAALPHLER THGVIVNNAS MAGLIGVAGG AGYAASKAAV VSLTKSLALA
YAERGVRVNA VCAGPVDTQM TYDEWELVGG PEEGLRRALA LSPARRITAP EEVAELICFL
ASDDAASITG AAIPIDGGKT AGLMPTERYR W
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