Gene Noca_0075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_0075 
Symbol 
ID4600126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp83670 
End bp84680 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content68% 
IMG OID639774686 
ProductABC-type sugar transport system periplasmic component-like 
Protein accessionYP_921308 
Protein GI119714343 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACAAGA TCGTTCGAGC TGCCGCCGTC GGTGTGGCCC TCAGTTCCGC CCTCTTCCTC 
TCGGCGTGCA GCGACACGGC TGAAACCGCA GACGCCGGAT CGACCTCGGA CGAGTCGCTG
AGCATCGGGT TCTTCGGCTT CTCGAAGACG AACTCGTTCG CGCAGGCGGC CTTCGCGGGA
ATCAGTGAGT ACGCCGAGGC GAACGACGCC ACCGCGGAGT TCACCGACCC GAACTTCGAC
GTGCAGGTGC AGCTCCAGCA GTTGAAGGAC GCGCTCACCA GCAAGCGCTT TGACGTCTGG
ATCGTGCAGG CGAACGACGG GGTTGCCGTT CAGCAGACGA TCCAGGAGGC CGTCGACGCC
GGCATCACCG TCGTCGCCGA GTTCACCCCG ATCGGCCCGG ACTTCGAGAC CCTGAAGCCG
CAGATCCCCG GGACGCTGAG TCTCGTCGAC GACCCGAAGC GGAACGGCAC GGTGCTCGGT
GAGCTCAGCA TCGACGCCTG TGCGGACGCC GGTGCGGACC CCTGCGAGGT CGCGTACCTG
CAGGGCTTCA GTGCGCAGCC CATCGACGTG GTGCGGACCG ACGCGTTCCT GGCGGCCGTG
GACCGGCCGG GCGTCGAGGT TGTGGCCAAC GTCGAGGGGG GTTACGCCCA GGACACCGGC
CGCGCCGCGG TCCAGGACAT CCTCCAGGCG AACCCGGACG TGGACGTGAT CGCAGGCGCG
TCCTCGGCTG CGCTGCTCGG CGCGATCGAG CTTCCCGGTA TCGATGACGT CCGCATCGTC
GGCAACGGCA GTTCGACGCA GGCCGTGACC GCAGTCCAGG ACGGTGACTT CTACGCCGTG
TACGTGTTCG CGGAGAAGAC CGCTGGCGCC AAGGCGGCCG AGATGGGTCT CGCCGCCGCC
CGCGGCGAAG AGGTCGACCC GGCGTACGTC GGCTACGACG AGCTGACCCC GTTCGGCGTA
CTGGGCACCA AGGAGAATCT CGACGGCTAC ACCGGCGAGT ACTCGGACTG A
 
Protein sequence
MHKIVRAAAV GVALSSALFL SACSDTAETA DAGSTSDESL SIGFFGFSKT NSFAQAAFAG 
ISEYAEANDA TAEFTDPNFD VQVQLQQLKD ALTSKRFDVW IVQANDGVAV QQTIQEAVDA
GITVVAEFTP IGPDFETLKP QIPGTLSLVD DPKRNGTVLG ELSIDACADA GADPCEVAYL
QGFSAQPIDV VRTDAFLAAV DRPGVEVVAN VEGGYAQDTG RAAVQDILQA NPDVDVIAGA
SSAALLGAIE LPGIDDVRIV GNGSSTQAVT AVQDGDFYAV YVFAEKTAGA KAAEMGLAAA
RGEEVDPAYV GYDELTPFGV LGTKENLDGY TGEYSD