Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_0075 |
Symbol | |
ID | 4600126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 83670 |
End bp | 84680 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639774686 |
Product | ABC-type sugar transport system periplasmic component-like |
Protein accession | YP_921308 |
Protein GI | 119714343 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACAAGA TCGTTCGAGC TGCCGCCGTC GGTGTGGCCC TCAGTTCCGC CCTCTTCCTC TCGGCGTGCA GCGACACGGC TGAAACCGCA GACGCCGGAT CGACCTCGGA CGAGTCGCTG AGCATCGGGT TCTTCGGCTT CTCGAAGACG AACTCGTTCG CGCAGGCGGC CTTCGCGGGA ATCAGTGAGT ACGCCGAGGC GAACGACGCC ACCGCGGAGT TCACCGACCC GAACTTCGAC GTGCAGGTGC AGCTCCAGCA GTTGAAGGAC GCGCTCACCA GCAAGCGCTT TGACGTCTGG ATCGTGCAGG CGAACGACGG GGTTGCCGTT CAGCAGACGA TCCAGGAGGC CGTCGACGCC GGCATCACCG TCGTCGCCGA GTTCACCCCG ATCGGCCCGG ACTTCGAGAC CCTGAAGCCG CAGATCCCCG GGACGCTGAG TCTCGTCGAC GACCCGAAGC GGAACGGCAC GGTGCTCGGT GAGCTCAGCA TCGACGCCTG TGCGGACGCC GGTGCGGACC CCTGCGAGGT CGCGTACCTG CAGGGCTTCA GTGCGCAGCC CATCGACGTG GTGCGGACCG ACGCGTTCCT GGCGGCCGTG GACCGGCCGG GCGTCGAGGT TGTGGCCAAC GTCGAGGGGG GTTACGCCCA GGACACCGGC CGCGCCGCGG TCCAGGACAT CCTCCAGGCG AACCCGGACG TGGACGTGAT CGCAGGCGCG TCCTCGGCTG CGCTGCTCGG CGCGATCGAG CTTCCCGGTA TCGATGACGT CCGCATCGTC GGCAACGGCA GTTCGACGCA GGCCGTGACC GCAGTCCAGG ACGGTGACTT CTACGCCGTG TACGTGTTCG CGGAGAAGAC CGCTGGCGCC AAGGCGGCCG AGATGGGTCT CGCCGCCGCC CGCGGCGAAG AGGTCGACCC GGCGTACGTC GGCTACGACG AGCTGACCCC GTTCGGCGTA CTGGGCACCA AGGAGAATCT CGACGGCTAC ACCGGCGAGT ACTCGGACTG A
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Protein sequence | MHKIVRAAAV GVALSSALFL SACSDTAETA DAGSTSDESL SIGFFGFSKT NSFAQAAFAG ISEYAEANDA TAEFTDPNFD VQVQLQQLKD ALTSKRFDVW IVQANDGVAV QQTIQEAVDA GITVVAEFTP IGPDFETLKP QIPGTLSLVD DPKRNGTVLG ELSIDACADA GADPCEVAYL QGFSAQPIDV VRTDAFLAAV DRPGVEVVAN VEGGYAQDTG RAAVQDILQA NPDVDVIAGA SSAALLGAIE LPGIDDVRIV GNGSSTQAVT AVQDGDFYAV YVFAEKTAGA KAAEMGLAAA RGEEVDPAYV GYDELTPFGV LGTKENLDGY TGEYSD
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