Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_0048 |
Symbol | |
ID | 4600099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 54476 |
End bp | 55060 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639774663 |
Product | GntR family transcriptional regulator |
Protein accession | YP_921285 |
Protein GI | 119714320 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGGAT TCTGGCGCTA CCTCAGTTCC AGCGCACACG ACGTCTCCCG CAACACGCTG CGCGAGGCGT TCCGCCTCCT CGTGCACGAG CGGCTGCTCG TGCACGAGCT CAACCGGGGC GTCTTCGTCC GGGAGGCGTC GCTCGACGAG GTCGCCGACC TGTTCCGGTT GCGCCGGGTG CTCGAGTGCT CCTCGGTCCG CACCCCGGAA CCGCCCGAGG CCGCGGTGGC GCGGCTCCGG TCGGCGGTGT CCGAGGGCGA GACGGCCGCC CGTGAGGGCC AGTGGCAGGA GGTCGGCACC GCCAACATGC ACTTCCACCT CGCGGTGGGG GCCCTCGCCG GGAGCCCCCG GATCGACGAG TTGATGGAGC AGCTGATGGC GGAGCTGCGC CTGGTCTTCC ACGTGATGGC GGCGCCCCAG AAGTTCCACG CGCCCTACCT CGAGGACAAC GCCCGGATCT GCGCCCTCGT CCAGGCCGGC CGCGGCGAGG AGGCCGCGGC GCTGCTCGAC ACCTACCTGG CGCGCGCCGA GCGGCAGCTG GTCCAGGCGT ACCGGCTCGT CGCCCACGCG ACGGCCAGCG CGTAG
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Protein sequence | MFGFWRYLSS SAHDVSRNTL REAFRLLVHE RLLVHELNRG VFVREASLDE VADLFRLRRV LECSSVRTPE PPEAAVARLR SAVSEGETAA REGQWQEVGT ANMHFHLAVG ALAGSPRIDE LMEQLMAELR LVFHVMAAPQ KFHAPYLEDN ARICALVQAG RGEEAAALLD TYLARAERQL VQAYRLVAHA TASA
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