Gene Noca_0035 details

Gene Information

• Locus tag: Noca_0035
• ID: 4598389
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 39113
• End bp: 39805
• Gene Length: 693 bp
• Protein Length: 230 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 639774650
• Product: GntR family transcriptional regulator
• Protein accession: YP_921272
• Protein GI: 119714307
• COG category: [K] Transcription
• COG ID: [COG1802] Transcriptional regulators

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGACCC CGACCGAGGT CCACGACGAC AAGCTGTTCC ACCAGCCGCC CCTGCGAGAG 
CGTGTCCGGG TCCGCCTCGA GCGGATGATC ATCGACGGGA CCTTCGAGCC GGGCGCGCAT 
CTGGTCGAGA CCGACCTCGC ACAGCGCCTC GGCGTGAGCC GGGGGCCGAT CCGGGAAGCG 
TTGTACCAGC TCCAGCTGCA GGGGTGGGTC GATCTGAGGC CTCGTCAAGG GGCGTTCGTC 
CACCAGCCCT CGGTCGAGGA GGTGGACCAG TTCTTCCAGG TCCGTGCCCT GCTGGAGTCC 
GAGATCTCCT CCCTGGTGGC CGGGCACGTG ACGGCGGCCG ACGTCGACGC TCTGCGTGCG 
ATGATCGAGG TGGCGAATCG GCATATCGCG GAGGGCAACG TGGCAGCCCT GGTCGCCGCC 
AACGCCGAGT TCCACGGCTA CATCCACCGT CTCGCCGGCA ACCCCGTCCT GGTGGACCTG 
GTCCAGATGC TCGACAAGAG GCTGCGGTGG TACTTCTCCG CCGTCACGAT GGAGCGCGCC 
GGTGACGCGT GGCACGAACA CGCCGCCCTG GTCGACGCCC TCGCCGAGGG CGACCGCGCA 
CGGGCCGTGG CCCTGACGCG CTCGCACAAC GAGCGCACCC GCTCGGCCTA CCTCACGCAC 
CGGCGGGTGC TCCAGGCAGC GGACGAAGAC TGA 

 

Protein sequence

MTTPTEVHDD KLFHQPPLRE RVRVRLERMI IDGTFEPGAH LVETDLAQRL GVSRGPIREA 
LYQLQLQGWV DLRPRQGAFV HQPSVEEVDQ FFQVRALLES EISSLVAGHV TAADVDALRA 
MIEVANRHIA EGNVAALVAA NAEFHGYIHR LAGNPVLVDL VQMLDKRLRW YFSAVTMERA 
GDAWHEHAAL VDALAEGDRA RAVALTRSHN ERTRSAYLTH RRVLQAADED