Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_0034 |
Symbol | |
ID | 4598388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 37757 |
End bp | 38983 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639774649 |
Product | hydroxyglutarate oxidase |
Protein accession | YP_921271 |
Protein GI | 119714306 |
COG category | [R] General function prediction only |
COG ID | [COG0579] Predicted dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGGGA GCCCGCGCCG ACCCCGTGTC GGGGTCGTGG GCGGCGGGAT CGTGGGCGCG GCCGTCGCGC GCGAGCTGCT CGCCCGGTAC GACGCCGAGG TCGTCCTCTG GGAGAAGGAG GACGGCCTCG GCCGGCATCA GACCGGCCAC AACAGCGGCG TCGTCCACGC CGGTGTCTAC TACACCCCCG GGTCTCACAA GGCACGCCTG TGCGTCCAGG GCGGTCGGTT GCTGCGGGCC TTCTGCGAGG AGCGCGGCCT GGTCTACGAG GAGTGCGGGA AGCTCATCGT CGCCACCGAC GAAGGTCAGC GAAGTCTGCT GCACGACATC GAGCGGCGAG GTCGGAGCAA CGGTGTGACC GGGCTGCGGT GGCTCGAGGG CGAGGAGATC GGATCGGTCG AGCCGCACGC TCGCGGTGTC GCCGCACTGC ACTCTCCTCG CACCGCGATC GTCGACTACG GCGCGGTCAC CCGAGCGCTG GGAGCCGAGG TCGTCGACCG CGGCGGCCTG CTCCACGTCG GGACGGCGGT CACGGGCCTG CAGACCCGGG GGCGTGAGGT CGTCGTGACC ACGTCCGCGG GCTCACAGGT CGTCGACCTG GTGGTGGCGT GCGCCGGGCT CCATGCCGAC CGGGTCGCCC GGATGGCCGG CGACGACTCC GAGCCGATGA TCGTTCCGTT CCGCGGCGAG TACCACGTCC TGCGCCCCGA CCGCAGCGCG CTGGTGCGCG GCATGATCTA CCCGGTGCCG GATCCCCGCT ATCCCTTCCT CGGCGTGCAC CTGACCCGGC ACGTCGACGG GTCGGTGTCG ATCGGCCCCA ACGCCGTCCT GGCACTCGCC CGGGAGGGCT ACCGCTGGCG CGACGTCGCT GGGCGCGACC TCTGGGAGAT GGCTCGGTGG CCGGGCTTCG CCCGCCTCGC GCGACGGCAC TGGCGCACCG GCGTGCGCGA GCTCGCCGGC TCGGCCAGCA AGCGGCGGTT CGTGGCGGCG GCCCGTCTCT ACGTGCCCGA GCTGCGGGTG GCGGACGTCG AGCGCCGAGT CGCGGGTGTC CGTGCGCAGG CCGTGGACCG GGACGGGACG CTTGTCGACG ACTTCCGCAT CGGCCGCGCC GGCCGGGTGC TGAGCGTGCG CAACGCACCG TCGCCCGCGG CGACCTCCTC GCTCGCGATC GCCGCCGAGG TCGTCGCCAT GCTGGCCGAC GATCTCCCGC GCCGGTCCGG AGGCTGA
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Protein sequence | MSGSPRRPRV GVVGGGIVGA AVARELLARY DAEVVLWEKE DGLGRHQTGH NSGVVHAGVY YTPGSHKARL CVQGGRLLRA FCEERGLVYE ECGKLIVATD EGQRSLLHDI ERRGRSNGVT GLRWLEGEEI GSVEPHARGV AALHSPRTAI VDYGAVTRAL GAEVVDRGGL LHVGTAVTGL QTRGREVVVT TSAGSQVVDL VVACAGLHAD RVARMAGDDS EPMIVPFRGE YHVLRPDRSA LVRGMIYPVP DPRYPFLGVH LTRHVDGSVS IGPNAVLALA REGYRWRDVA GRDLWEMARW PGFARLARRH WRTGVRELAG SASKRRFVAA ARLYVPELRV ADVERRVAGV RAQAVDRDGT LVDDFRIGRA GRVLSVRNAP SPAATSSLAI AAEVVAMLAD DLPRRSGG
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