Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_0002 |
Symbol | |
ID | 4598432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 2029 |
End bp | 3255 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639774614 |
Product | DNA polymerase III subunit beta |
Protein accession | YP_921239 |
Protein GI | 119714274 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGAGCC CAGAACGTGC ACTTCTCCCA CCCCCGTTCA ACCCCCGCTC AACCCTCGCT CCACCGAGCC GACCCGAAGG AACCATCGTG AAGTTCCGCG TCGAGCGCGA CGTGCTCGCC GATGCCGTCG CCTGGGCTGC CCGCAGCCTC CCGGTCCGTC CCAGCGTCCC CGTCCTCGCC GGCCTGCTCG TCGAGGCGAG CGACGACGGC CTGGTGCTCT CCACCTTCGA CTACGAGACC TCCGCCCGGG CCACCCTGAC GGCCGAGGTG AGCGACGAGG GGCAGGCCCT GGTCAGTGGC CGACTGCTCG CCGACATCTG CCGGAGCCTG CCCGCGAAGC CCGTCGAGAT GGTCCTCGAC GGGGCCCGGG TGTCGCTGAC CTGTGGCTCG GCGCGGTTCA GCCTGCAGAC GATGCCGGTT GACGACTACC CGTCCCTGCC GAGCATGCCC GCGGCGACCG GCACCGTGCA GAGCGAGGCC TTTGCACACG CCGTCGCCCA GGCCGTGACG GCGGCGGGTC GCGACGACAT GCTGCCCGTG CTCACCGGCG TGCGGATCGA GATCGACGGC TCGACCATCT CGCTGCTCGC CACCGACCGG TTCCGCCTCT CCCACCGGGA GCTGGAGTGG AGTCCGCGGA CCCCGGACGA GTCGGCGGCC GCCCTGGTCC CGGCACGGGT CCTCGGCGAC ACCGCCAAGT CCCTGACCGG GGGCGGCGAG GTCACGATCG CGCTGGCGAC CACCGGCTCC GGCGAGGGCA TCATCGGCTT CGAGGGCCAT GGTCCCGGCG GACTGCGTCG GACCACGACC CGGCTGCTCG ACGGCGAGTT CCCGAAGGTC CGCAGCCTGT TCCCGAACGA GCACCAGACC ACGGCGCTGG TCGACAAGGC CGCGCTCGTC GAGTCGGTGA AGCGGGTGGC GCTGGTCGCC GAGCGCAACA CCGCGGTCCA GCTCGCCTTC AGCGACGGCG TACTGACCCT CGACGCCGGG TCGGGCGACG AGGCCCAGGC CTCGGAGTCG ATCGAGGCGA CCATCGACGG TGAGGACATC ACCACGGGCT TCAACCCGCA GTTCCTGCTC GACGGCCTGA CCGCCATCGA CCAGCCGGTG GTCGAGCTCG CCTTCACCCA GGCCTCCAAG CCGGTGGTGA TCAGCGGCGC GGTCGACGGC GACGACACCG ACTCGTCATT CCGCTACCTG CTGATGCCGC GCCGCCTGCT CTCCTAG
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Protein sequence | MQSPERALLP PPFNPRSTLA PPSRPEGTIV KFRVERDVLA DAVAWAARSL PVRPSVPVLA GLLVEASDDG LVLSTFDYET SARATLTAEV SDEGQALVSG RLLADICRSL PAKPVEMVLD GARVSLTCGS ARFSLQTMPV DDYPSLPSMP AATGTVQSEA FAHAVAQAVT AAGRDDMLPV LTGVRIEIDG STISLLATDR FRLSHRELEW SPRTPDESAA ALVPARVLGD TAKSLTGGGE VTIALATTGS GEGIIGFEGH GPGGLRRTTT RLLDGEFPKV RSLFPNEHQT TALVDKAALV ESVKRVALVA ERNTAVQLAF SDGVLTLDAG SGDEAQASES IEATIDGEDI TTGFNPQFLL DGLTAIDQPV VELAFTQASK PVVISGAVDG DDTDSSFRYL LMPRRLLS
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