| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2835 |
|---|
| Symbol | uppP |
|---|
| ID | 3705526 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 3212147 |
|---|
| End bp | 3212944 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637739310 |
|---|
| Product | undecaprenyl pyrophosphate phosphatase |
|---|
| Protein accession | YP_344811 |
|---|
| Protein GI | 77166286 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1968] Uncharacterized bacitracin resistance protein |
|---|
| TIGRFAM ID | [TIGR00753] undecaprenyl-diphosphatase UppP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGATTTTA TCCATATTCT GGCGCTGGCT ATTTTGCAAG GACTCACTGA ATTTCTTCCT
ATCTCCAGTT CCGCCCATCT TATTCTTCTG CCGGTTCTCG CTGGCTGGAC CGATCAAGGG
CTTGCCTTCG ACGTGGCGGT TCACCTGGGA ACCTTAGTTG CGGTCATCAG CTATTTCCGG
CTAGAACTAG CAAGGATGGC GAGGGATTGG CTCCAATCCC TCGCTGCGGG CCAACAACAA
GGAGAAAGCC GTCTTGCCTG GGCCGTACTC CTTGGTACCT TACCGGTCGG ATTAGTCGGT
ATCATGCTAA CCGAAACCAC CCAAGAAGCG CTCCGCTCTC CCCTAATCAT CGCCTGGAGC
ACGGTAGGGT TCGGATTCCT TCTCGCCTAC GCTGACTGGG CCGGCAAACA ACAACGAAAC
GAGCATACCC TCACCTGGCG CGACATCCTC TTCATTGGCC TAGCTCAAGC CTTAGCCCTA
ATTCCCGGCA CCTCCCGTTC CGGCATCACC ATCACTGCCG GCCTAATGTT AGGGCTCACT
CGGGAAGGAG CCGCCCGATT TTCCTTCTTA TTGGCGATCC CGGTTATCCT TCTTGCCGGC
GGACTAGCCG CTTTGGATTT GTTGAATCAT ACTGAAACCG TAGATTGGAA CGCTCTCGCC
CTTGGCGCCC TAATTTCCGG CCTTTGCGCC TATGCCTGCA TCCACTATTT CTTTAAATTT
CTTCAGCGTA TCGGCATGCT TCCCTTCGCA GTATACCGGT TACTGCTGGG CGCTCTATTA
TTTTATCTGT TTTCATAA
|
|---|
| Protein sequence | MDFIHILALA ILQGLTEFLP ISSSAHLILL PVLAGWTDQG LAFDVAVHLG TLVAVISYFR
LELARMARDW LQSLAAGQQQ GESRLAWAVL LGTLPVGLVG IMLTETTQEA LRSPLIIAWS
TVGFGFLLAY ADWAGKQQRN EHTLTWRDIL FIGLAQALAL IPGTSRSGIT ITAGLMLGLT
REGAARFSFL LAIPVILLAG GLAALDLLNH TETVDWNALA LGALISGLCA YACIHYFFKF
LQRIGMLPFA VYRLLLGALL FYLFS
|
|---|
| |