Gene Noc_0675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0675 
Symbol 
ID3706923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp732212 
End bp733591 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content57% 
IMG OID637737183 
ProductSignal transduction histidine kinase 
Protein accessionYP_342724 
Protein GI77164199 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000458656 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAACC GCCTTTTCTG GAAAATTTTT CTCTCCTTCT GGATTTCCCT CATTCTGTTC 
GCCGGCGCCG GTCTGCTGGC AGCGTCGCTC TTTCTGGAGC GCACACACGC GCAGGATGAG
ATCGAAAGTC CACGCGACCG GCATTTAACC TATATTAACG AGGCTCGGTT AGTTGCGAAA
ATCGAAGGAA TTGAAGGACT GAAGTCGTGG CTAAAAAAAC TGGACCGAAC CGAGGCAATC
CCCTTTTTAT TGATCGATAG AGCAGGCAAG GATTTACTTG ATCGACCCAT ATCATCCCAC
CTCGCGGAAC GCTTAGATCG CAGGAGGAAG CCACGGCGTC CGACGGATGA AAGGCGATCG
CCTGGGCGCC GTGACCTGAT TCAGGTACCC GGCGCCGGCG AATACCTGCT GGTGCCAAAC
TTTCAGGCGG TAACCCTGAA TAGAGTGCTG AGCAGGCCGC GGGTCATCGC GCCCCCCGTC
ATCGTGGCCG CGATTGTCAG CGGGCTGGTC TGCTTTCTCC TGGCTGGATA TCTCACCAGG
CCTATACGGC GACTCAGCAA TGCGACCCAT CAATTCGCTG CCGGTAATCT CAGTTTGCGG
GTCGCATCAA CCATGGGTAG GCGCAGGGAT GAAGTCGCCG ATCTCGCCCG TGATTTCGAC
CATATGGCCG AACGCCTGCA AATTCTCATC GGCTCACAAA AGCAGTTGCT CAGCGACGTT
TCACATGAAC TTCGCTCACC GTTGGCTCGG CTGCAGGTGG CATTGGGGCT CGTACGCCAA
CGCCAACAAC ATCAGACCAA TGCCGAACTG GATCGCATCG AGCACGAAGC CGAACGTCTG
AATGAATTGA TCGGACAACT CTTATCACTC ACGCGCCTGG AATCCAATAC CCAGCTCACC
CATTCAGAGC CGGTTGATGT AGCCGCCCTC CTGGCGGAAG TCGCTGAGAA CGCGGATTTT
GAGGCGCGTG CCGCGAATCG CCAGGTGCGC ACCATCAATA ATAGCCTGTC GGCAACCATC
GAGGCCAACG AACCCCTGCT GAGAAGCGCC CTGGAAAATG TAGTGCGCAA CGCAATCAGA
TATACGGATG AGAATACCTC GGTAGACATC ACCCTGCAGC ACGACCCTGA GCACCCCGGC
TGGCTGCTTG TTCAAGTGCG AGACCATGGT CCCGGCGTGC CGGACGATAT GTTGACGAAA
TTATTTGAAC CCTTCGTGCG CGTGGGTGAT GCCCGCGACA GGGAGAGCGG GGGGTACGGC
CTGGGATTAG CGATCGCGGA ACGCGCGATA CACCTGCACG GTGGCGTAAT ATCCGCAAGC
AATGAACCCA ATGGCGGGCT CAGTGTGCGC ATTCGCCTAC CGCTTAATCA GGCCAAGTAA
 
Protein sequence
MMNRLFWKIF LSFWISLILF AGAGLLAASL FLERTHAQDE IESPRDRHLT YINEARLVAK 
IEGIEGLKSW LKKLDRTEAI PFLLIDRAGK DLLDRPISSH LAERLDRRRK PRRPTDERRS
PGRRDLIQVP GAGEYLLVPN FQAVTLNRVL SRPRVIAPPV IVAAIVSGLV CFLLAGYLTR
PIRRLSNATH QFAAGNLSLR VASTMGRRRD EVADLARDFD HMAERLQILI GSQKQLLSDV
SHELRSPLAR LQVALGLVRQ RQQHQTNAEL DRIEHEAERL NELIGQLLSL TRLESNTQLT
HSEPVDVAAL LAEVAENADF EARAANRQVR TINNSLSATI EANEPLLRSA LENVVRNAIR
YTDENTSVDI TLQHDPEHPG WLLVQVRDHG PGVPDDMLTK LFEPFVRVGD ARDRESGGYG
LGLAIAERAI HLHGGVISAS NEPNGGLSVR IRLPLNQAK