| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0302 |
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| Symbol | aspS |
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| ID | 3706473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 330232 |
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| End bp | 332019 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637736816 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_342360 |
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| Protein GI | 77163835 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0234684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAGCC ACTATTGCGG CGAACTTTCC GAGGCCCATC TTGATCAAAG TGTCACTTTA
TGCGGCTGGG TAAATCGCCG CCGAGATCAT GGTGGGGTAA TTTTTATTGA TCTTCGTGAT
CGGGAGGGCC TCATTCAATT GGTTTTTGAT CCAGAGTATT CTCCGGAAAG CTTTAGGCAT
GCCGAACAGA TACGGAGTGA ATATGTGCTT CAGGTCAAGG GCCGGGTACA GCACCGGCCG
GAAGGCACCG AAAATCCAGA TCTCAAGACA GGCCAAGTGG AAGTATTGGG TCAGGAACTC
ATTTTACTTA ATGCTTCGGA AACGCCGCCT TTTCCAGTGG ATGAAAAATT AGAGGTGGGC
GAAGACATCC GGCTGCGCTA TCGTTATATT GACCTCCGGC GGCCAGAAAG CTTGCAGCGC
CTGCGGTTCC GTTCCGCCAT TATTCGGCAA TTGCGCAAGT TTTTGGATGA GCGGGGTTTT
CTCGATATTG ATACGCCCAT TCTCACCCAG TCAACGCCAG AGGGCGCCCG GGATTTTTTG
GTGCCAAGCC GTACCCATCC CGGCCAATTT TTTGCCTTGC CTCAGTCCCC CCAGTTATTT
AAACAGCTCC TCATGGTTGC TGGGGTGGAT CGCTACTATC AAGTAGTGCG CTGTTTTCGT
GATGAAGATC TACGGGCCGA TCGCCAGCCG GAATTTACGC AGCTCGACAT AGAGGCTTCC
TTCCTTCATG AGGAGACGCT TATGGCGTTA ATGGAAGAGA TGTTCAAGGA GCTGTTTGCC
ACGGTATTAG AAGTGCCCCT CCATACCCCC TTTGTCCGGA TGCCCTATGC CGAAGCCCTG
GCCTGTTTTG GTTTAGATAA ACCTGATTTG CGCATTCCCC TGCGATTGGT AGAGGTGGGG
GATTTGATGA AAACAGTGGA TTTTAAGGTT TTTGCCCAGC CAGCCCAGGA TCGGGATGGA
CGAGTCGCCG CATTGAGATT GCCCGGCGGC GGCAAACTTA GCCGTAAAGA AATTGAGGAG
TATACTCAAT TTGTGGCTAT CTACGGCGCC AAGGGTTTGG CTTATATTAA AGTGGTTGAG
CGCAGCCGCG GGCGGGAGGG ATTGCAGTCC CCTATCCTCA AGTTTTTGCC CGATGAAGTG
ATTGGAGCCA TGCTGGAACG AACGGAAGCT GAAAATGGAG ATATCGTATT TTTCGGTGCT
GATAAAGCGT CCATTGTTAA TGAATCCCTT GGAGCCTTGC GAGTGAAATT AGGCCACGAT
CATGGCTTGG TAGAGCATGG CTGGAGTCCG CTATGGGTCA TAGATTTTCC TATGTTCGAG
TGGGATGAGG ATGACCACCG TTGGCATGCC TTGCATCACC CTTTTACTTC TCCCAAAGAA
GAAGATCTCT CCTTATTGGA GCAGAATCCG GGAGCTTGCC GCTCCCGTGC CTATGATTTA
GTGCTCAATG GTACCGAGGT GGGCGGGGGA TCCATCCGCA TTTCCCAGTC CCAAGTGCAG
AGTCAAGTGT TTCGCTTGCT AGGTATTGGC GATGAGGAAG CCCAAGATAA ATTTGGATTT
CTTTTGGACG CGCTGAAATA TGGCTGCCCG CCCCATGGTG GGATTGCGTT TGGTTTGGAT
CGGCTGGTCA TGCTGATGAC TGGAAGCGCC TCGATCCGGG AGGTCATCCC GTTTCCCAAG
ACCCAGACGG CGGCTTGCCC GCTTACCGGC GCGCCAGGCC AGGTTGCGGA AGCGCAGTTG
CGGGAGTTGG GGATTGGCGT GCGCAGGCTA GCTTCGGATA AAGTCTAA
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| Protein sequence | MRSHYCGELS EAHLDQSVTL CGWVNRRRDH GGVIFIDLRD REGLIQLVFD PEYSPESFRH
AEQIRSEYVL QVKGRVQHRP EGTENPDLKT GQVEVLGQEL ILLNASETPP FPVDEKLEVG
EDIRLRYRYI DLRRPESLQR LRFRSAIIRQ LRKFLDERGF LDIDTPILTQ STPEGARDFL
VPSRTHPGQF FALPQSPQLF KQLLMVAGVD RYYQVVRCFR DEDLRADRQP EFTQLDIEAS
FLHEETLMAL MEEMFKELFA TVLEVPLHTP FVRMPYAEAL ACFGLDKPDL RIPLRLVEVG
DLMKTVDFKV FAQPAQDRDG RVAALRLPGG GKLSRKEIEE YTQFVAIYGA KGLAYIKVVE
RSRGREGLQS PILKFLPDEV IGAMLERTEA ENGDIVFFGA DKASIVNESL GALRVKLGHD
HGLVEHGWSP LWVIDFPMFE WDEDDHRWHA LHHPFTSPKE EDLSLLEQNP GACRSRAYDL
VLNGTEVGGG SIRISQSQVQ SQVFRLLGIG DEEAQDKFGF LLDALKYGCP PHGGIAFGLD
RLVMLMTGSA SIREVIPFPK TQTAACPLTG APGQVAEAQL RELGIGVRRL ASDKV
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