| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0044 |
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| Symbol | |
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| ID | 3705919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 41378 |
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| End bp | 43102 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637736568 |
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| Product | DNA primase |
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| Protein accession | YP_342116 |
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| Protein GI | 77163591 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.723286 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTATGG GAGAGCGGAT CCCGCAAGAA TTTATTGATG AACTGGTGGC TCGTACGGAT
ATCGTGGAAT TAATTGATTC CCGTGTTCCT TTGCGTAAAG CAAGCCACAA TTATGTGGCT
TGCTGCCCTT TTCACAATGA AAAGACCCCG TCTTTTACGG TGAGTCCCCA GAAACAGTTC
TATTATTGCT TTGGTTGCAG TGTTCATGGG ACGGCCATTG GTTTTTTGAT GGCGTTCGAC
CGCCTTAGTT TTATCGAGGC GGTAGAAGAA CTGGCGCAAC GAGCGGGAAT GATGGTTCCC
CAAAGCTCGA AGCAACAAGA CTACTACAAT CGGCACCAAG GCTTATATGA AGTACTGGCC
TGTGCCGCCG AGTTTTATCA GCAGCAGCTG GAGGCTAGTG CCTATCAAGG GCAGGTTAAG
GCTTATTTGC GGGAACGAGG TCTAAGTGGC CCTATTATTG CCGAATTTGG ACTAGGTTTT
GCTCCGCCCC GCTGGAATGC TTTATTACAT TATACCCGGC CCTCCCTTAA ATCTTACCTT
CAGGCAGCGG GTTTAACGAT CAGCAAAGGC GAGGATCGTT ACTATGATCG GTTTCGAGAT
CGTTTAATAT TCCCCATTCA TGATTATCGG GGCCGGGTAA TTGGTTTCGG CGGCCGTCTT
TTGGGTGATG GCTCTCCAAA ATATCTTAAT TCACCTGAAA CAGCGTTGTT TCATAAAGGA
CGAGAGCTTT ATGGCTTGTA TCAGGTACGA AAGTCCCTCC ACCGCTGCGA TAGGTTGTTG
GTGGTGGAAG GATACATGGA TGTTTTGGCC CTAGCAGAGC ATAAAATTCG CTATGCAGTC
GCGACTTTAG GGACAGCAAC GACTTCGGAT CATTTGACTC GCTTGTTCCG GATAACGCCA
GCGGTCATAT TTTGCTTTGA TGGCGATCGG GCAGGTTACC AAGCAGCCTG GCGGGCGCTA
GAAACGGCAC TGCCTTTGCT TAGTCAAGGG CGACAGGTAC AGTTTATGTT TTTACCCCAA
GGGGAAGATC CCGATACTAT GGTACGTGCT GAGGGGCAGA CGGCTTTTGA AGCGCGCTTG
GCAGAGGCCG TGCCGCTATC TGATTTTTTG TTAAATAATT TGCGGCAGAA GGTTAATCTT
AGCAGTGTGG ATGGATGCGC GCGTTTGGTG GAACTTGCCC GACCCCTCCT AGCTCGTATC
CCACCGGGAG TTTATCAAGA TATGCTGCTT GCGCGTCTAG CGGAACTCGC CCAGATAGAG
CAGACAACGC TTATTCGCCA CTTGAGTCCA GGAAAGAAAC CTACGGCGGT GCCTCTTCGG
CGATTGGAGC AAGGTGCCGC GTCTCCAACA CGACGGGCAG TAGCCATTTT GCTTCAACGG
CCTAAGATGA TTCAATGGGT AGATAAGAAT TTATCTCTTA GGGGACTAGA AGGTGCAGGG
GCAGAATTAC TTCAGAAACT AGTTGATTTA TTGCAAAACA ATCCACATCT AAATACGGCT
GCCCTCCTTG AACGCTGGCG GGATTCAGAA ATGGGCCGGT ATCTGGAGCA ATTAGCCGGC
TGGGAGTTGC TTTTGACTGA CGAGGATATG GTATTGGAGT TACAAGCTGC TTTAGAGCGT
TTGCAGGTAC AGGGGGCAGA GCAGCGGATA ATAACTCTTT CCAATCAGCC TTCCTTGACG
GGAGCAGAGC AACGAGAGTT GCTTGCTCTG CTGGCGGAAA AATAA
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| Protein sequence | MPMGERIPQE FIDELVARTD IVELIDSRVP LRKASHNYVA CCPFHNEKTP SFTVSPQKQF
YYCFGCSVHG TAIGFLMAFD RLSFIEAVEE LAQRAGMMVP QSSKQQDYYN RHQGLYEVLA
CAAEFYQQQL EASAYQGQVK AYLRERGLSG PIIAEFGLGF APPRWNALLH YTRPSLKSYL
QAAGLTISKG EDRYYDRFRD RLIFPIHDYR GRVIGFGGRL LGDGSPKYLN SPETALFHKG
RELYGLYQVR KSLHRCDRLL VVEGYMDVLA LAEHKIRYAV ATLGTATTSD HLTRLFRITP
AVIFCFDGDR AGYQAAWRAL ETALPLLSQG RQVQFMFLPQ GEDPDTMVRA EGQTAFEARL
AEAVPLSDFL LNNLRQKVNL SSVDGCARLV ELARPLLARI PPGVYQDMLL ARLAELAQIE
QTTLIRHLSP GKKPTAVPLR RLEQGAASPT RRAVAILLQR PKMIQWVDKN LSLRGLEGAG
AELLQKLVDL LQNNPHLNTA ALLERWRDSE MGRYLEQLAG WELLLTDEDM VLELQAALER
LQVQGAEQRI ITLSNQPSLT GAEQRELLAL LAEK
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