Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_1321 |
Symbol | |
ID | 5773940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | + |
Start bp | 1208508 |
End bp | 1209338 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641316965 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001582655 |
Protein GI | 161528829 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00000000000224332 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCAAAAAG TAGCTCTTGT AACTGGAAGT TCTTCAGGAA TTGGATTAGA AGCATCACTA GCACTTGCAA AAGATGGATA TCACACATTT GCCAGTATGA GGGACACATC AAAAGCAGGA GAATTAGAGA ATGCTGCAAA AAAAGATAAT CTTCCAATCG AAGTAATAGA GCTTGATGTC GATAAAGAAG AATCAATTGT TTCTGCAGTA AAAAAAGTAA TAGATTCAGC AGGAAGACTG GATGTTTTAG TTAACAATGC AGGATATGGA CAGTTTGGAT GTACAGAAGA TGTCTCAGTT GATGATTTTA GAAAACAATT TGAAACTAAT TTCTTTAGTA TTGTAAGAAT TATTCAAGAA GTTACCCCAA TTATGAGAAA TCAAAATTCG GGAAGCATCA TAAACATTAG TTCTGTTGCT GGAAGAATGG GATTACCAGG TTCTCCAGCA TACATTAGCT CAAAATTTGC ATTAGAAGGA CTAGGAGAAT GTTTACGATA TGAATTAGGT CAGTTTGGAA TCAAGACCAC TCTAATTGAA CCAGGAGTTA TCAAGACAAA CTTTTTTGAA TCAATGAAAA TTCCAGATTC AAAGACAGAC CCAAAATACA AGGAATTAAC TGATCACATC TTAGCAGGAT TAAAGATGAT GGTTCAGATG GGCACTGCTC CATCACAAGT AGCTGAAGTA ATTATCAAGG CAATTCATGA TGATGAGATG CTTCCAAGAT ATGTGGTTGG AACTGATGCT GCAATGTTTA TGGAGGCAAA AAAGATGAAG ACAGACCTAG AATTTGAGAA ATACATGAGC AAAGAGCTCT TTCCAGGATA A
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Protein sequence | MQKVALVTGS SSGIGLEASL ALAKDGYHTF ASMRDTSKAG ELENAAKKDN LPIEVIELDV DKEESIVSAV KKVIDSAGRL DVLVNNAGYG QFGCTEDVSV DDFRKQFETN FFSIVRIIQE VTPIMRNQNS GSIINISSVA GRMGLPGSPA YISSKFALEG LGECLRYELG QFGIKTTLIE PGVIKTNFFE SMKIPDSKTD PKYKELTDHI LAGLKMMVQM GTAPSQVAEV IIKAIHDDEM LPRYVVGTDA AMFMEAKKMK TDLEFEKYMS KELFPG
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