| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1320 |
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| Symbol | |
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| ID | 5774527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 1206022 |
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| End bp | 1208469 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641316964 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001582654 |
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| Protein GI | 161528828 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000000000720865 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCACGTCT CATGTAGTGG TTGTGGAATA GAAGATCTCC TAGAGTTCTC AAAGAATGTA
GATGAAGTGT TTTTAGAATT TCTTTCAAGA TATGACAAGG GACTAGTCAC AGAGAAAGGA
CTTTCTGAAG GCCTCAAAGA TGAGGGAATT GTCCGTGCTG AAGTTGAAAT CAAAAATATG
ATTGGCAAAA ACAAGCCAGA CAAAATAACT GAAGAGATTC TATATTCCAA AAAAGACTAT
GTTTCACAAT ACAAGGTTTT GAGCAATCCT GAGCCTAAAA TGGGCTGCAA AGTAGAAGAT
TTGGGACTAG ATGAATCAAT TACAGAACAT CTAAAGGAAT TGGAAATAAA ACAGTTTTAC
AAATTCCAAG AAGAGGCAAT TAGTGAGATT GCATATGGAG AAAATGTAGT AATTGAAGCT
CCAACTGCTT CAGGAAAAAC AGAAGCCTTT TTGATTCCAG TAATTCAGAG AATAAAAAAA
GATTCCAGCG AAGGTAATGT CTTTGCAATC TTTGTATACC CAACAAAAGC ACTTGCACGA
GACCAATTCC CTAAAATCAA AAAATTTGTA GAAAAGATTG GGGTTAGAGT AGAGGTCTTT
GATGGAGACA CAAAACAAAA CGACAGAAGA GAAATAATTG ATAATCCACC ACAAATTCTT
GTTACAAACT TTGATGTATT GCACTATCAT ATGTGGCACC AAACAAAATT CTCATCATTA
CTAACAACAA CAAGAATTAT AGTTACAGAT GAAGCACATG TCTATTCAGG AATTTTTGGT
TCTAATGTTC ACTATATCAT AAAGAGACTC AAAAGAGTAT GTACAAACAA GCTGCAATTT
GTTGCGGCAT CAGCTACACT TGAAGATGCA AAAGAATTTT GTGAAAAATT GTTTGGAGAA
AAGATGCAAA AAATTCAAGG GTCAGGAAAG AAAGGCCAGA CAGACTTTGC AATGCTTTTC
CCATCACTTC GAACTCAAAG GGCTTTGATG GTAGAACTCA CAAAGAAACT AACTGAGAAA
AATCACAAGA CTATGGTCTT TAACAACTCG CATCTAAATT CCGAACTTTT AGCAATTCAG
GCAAAAAAGC AAAAGGTCAA CATCAAAGTT CACAGAGCAG GACTGATGGC AAATTACAGA
ACATTTGTTG AAAAACAGTT CAAAGATGAT TTACTTGATG CAATTTCATG CACTCCCACG
CTTGAATTAG GCATAGATGT GGGAAATGTT GACTGTGTTA TCTCATCTAC CATACCAGTA
AATCGACTAA TCCAAAGAAT AGGAAGAGCC GCAAGAAAGG GTCAAAGAGG TTATGCATTT
TTGGCATTGG GAAATGACCC AATATCACAA TATTACAAGA ATCATCCAGA TGACTATTTT
GAGGATACTG AAAAAACCTA CATCGATCCC AAGAATCCAT TTGTAGAAGA GTTCCAGGTA
TTAGCAATGG CATGTGATAG ACCAATCTCA AAACATGAGC TTAAAGAACA TCAAGAAGTA
ATAGAGCACC ACATCATCAA AGAGAATCTA AAAGAATTCA ACAATAGAAT AATTCCAAAT
TTTGACAAGA TCAATTCTTT ACTCAATGAA TACAGTATTA GAGGAATAGG ACAATCAATT
GATATTTTCT TAAATGGTAA AAAAGTAGGA GATAGAATTT TACCAATTGC ATTAGAGGAG
TTACACAAAG ATGCAATCTA TTTTCTTGCA GGTATTCGTT ATAAAGTAAA AGAGTTTGAT
TATCCAGAAA AAAACTATGC AAAGATTGAG AAAATTCCAA GAGATTATCC ATACTATACT
AAAGCACTAA CTGAAGAATG GCCTACAATT GAGACAGTTT TTGATAAAAG GATTGCAAAC
GGAGTTGAAG TTGCATTTTG TAAACTACAC ATTGAGAAAA AAGTATACGG CTATGTCAAC
ATTGAGCTTG GACAAGAAGT AACACAAGGA GAAAAAGTTC TGCTAGATAC ACCTCTAGAA
TATGATTTTG TTACAAAGGG GATTGTCTTT CATGCACCTA GACCTCTCAA AGTAATGGGA
GAATCTGAAG ATGAGGAATA TACTGAAGCC AGCGGATACC ATGCAACAGA GCATGTAGTG
ATTGAGGGAA GCAATATGAT TACTGGTGGA GTCTCTCAGG ATTTGGGAGG CATATCACTG
GGAACATCAG GCTTGATTTT CATCTATGAT GGGGCAATTG GAGGAAGTGG GGCAAGCAAA
GCTCTCTATG ATAGATTTGA GCAGGCACTG GAGAGAAGCA TGTTCATTGT AAAGGAATGT
CCATGCAAAA ATGAAGCCGG ATGTCCAAGA TGTACATTCT CATACAGATG TGGAAACAAC
AACGAATATC TGCACAAATA TTCAGCACTA GAGATTTTGG AGAGAATTAA CAAAGGAGAG
AAAACAGAAC TAGTTGATCC AACTGAAGGT GACAGACCTC TAGTATAA
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| Protein sequence | MHVSCSGCGI EDLLEFSKNV DEVFLEFLSR YDKGLVTEKG LSEGLKDEGI VRAEVEIKNM
IGKNKPDKIT EEILYSKKDY VSQYKVLSNP EPKMGCKVED LGLDESITEH LKELEIKQFY
KFQEEAISEI AYGENVVIEA PTASGKTEAF LIPVIQRIKK DSSEGNVFAI FVYPTKALAR
DQFPKIKKFV EKIGVRVEVF DGDTKQNDRR EIIDNPPQIL VTNFDVLHYH MWHQTKFSSL
LTTTRIIVTD EAHVYSGIFG SNVHYIIKRL KRVCTNKLQF VAASATLEDA KEFCEKLFGE
KMQKIQGSGK KGQTDFAMLF PSLRTQRALM VELTKKLTEK NHKTMVFNNS HLNSELLAIQ
AKKQKVNIKV HRAGLMANYR TFVEKQFKDD LLDAISCTPT LELGIDVGNV DCVISSTIPV
NRLIQRIGRA ARKGQRGYAF LALGNDPISQ YYKNHPDDYF EDTEKTYIDP KNPFVEEFQV
LAMACDRPIS KHELKEHQEV IEHHIIKENL KEFNNRIIPN FDKINSLLNE YSIRGIGQSI
DIFLNGKKVG DRILPIALEE LHKDAIYFLA GIRYKVKEFD YPEKNYAKIE KIPRDYPYYT
KALTEEWPTI ETVFDKRIAN GVEVAFCKLH IEKKVYGYVN IELGQEVTQG EKVLLDTPLE
YDFVTKGIVF HAPRPLKVMG ESEDEEYTEA SGYHATEHVV IEGSNMITGG VSQDLGGISL
GTSGLIFIYD GAIGGSGASK ALYDRFEQAL ERSMFIVKEC PCKNEAGCPR CTFSYRCGNN
NEYLHKYSAL EILERINKGE KTELVDPTEG DRPLV
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