Gene Nmar_0962 details

Gene Information

• Locus tag: Nmar_0962
• ID: 5774124
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosopumilus maritimus SCM1
• Kingdom: Archaea
• Replicon accession: NC_010085
• Strand: -
• Start bp: 840580
• End bp: 841332
• Gene Length: 753 bp
• Protein Length: 250 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 641316601
• Product: hypothetical protein
• Protein accession: YP_001582296
• Protein GI: 161528470

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 15
• Fosmid unclonability p-value: 0.000273165
• Fosmid Hitchhiker: No
• Fosmid clonability: decreased coverage

Sequence

Gene sequence

ATGAAACCTG TCCCAAGAAT TTCCACTCGA GGGTACTATG ATCTAAAAAC TGGTAAAACC 
CTAAAGCGGA ACAACTATTA CCTTTATCCA AAAAAAGATT TTCAAAAATT AATTGATTCT 
AAAGAGTTAA CCATTATGAT TCATGGTCTA AGAAATGACA ATGCTGGTGC TATTGCAAAA 
GCAGTTTTGG CACGTAATCG ATTGAGAAAA TTAGGATATT CTCATCCAGT AATTGGATTT 
AGTTATGATT CAAACACCAC TGGTGCTCAT TTAATCAAAC ATGCAAAACA TGCTTTAGCT 
GTAGGACAAA GTATTGCAAA AAAGAACGGA CGGAATCTCG GAAAATTCAT TGAGGATTTT 
AAAGAATCTA GTCCAAAAAC AAAGATACGA TTAATGGGAC ACTCTCTAGG TTCTCAAGTG 
ATTCTCAGTA CAATTGAATA TCTTGCTAAA AAGAAACAAA ATTCTGGAAT CCTAGAAAGT 
GTCTATTTCT TTGGAGCCTC TATAACTGAA GATGTTCCGT CTTCAAAAAA GTATGGTAAG 
CTACTCCAAA CTGTTGTCAA TAAAAAAATC CTAAATCATT ATGCTCCTTC TGATGAGGTT 
CTAAGTTGGG CTGATGACAA AAAGTATGTT TTGGGACCCT TAGGTCTAAA TGGTGCAATT 
GGAAAACCTA TCAAAAAATA TCATCAGAAA CTAGTCAAAC CAAAAAACCA TAGATTTGCA 
AGTTATGCTG CTGTACTAAA CACATTTCCG TAG 

 

Protein sequence

MKPVPRISTR GYYDLKTGKT LKRNNYYLYP KKDFQKLIDS KELTIMIHGL RNDNAGAIAK 
AVLARNRLRK LGYSHPVIGF SYDSNTTGAH LIKHAKHALA VGQSIAKKNG RNLGKFIEDF 
KESSPKTKIR LMGHSLGSQV ILSTIEYLAK KKQNSGILES VYFFGASITE DVPSSKKYGK 
LLQTVVNKKI LNHYAPSDEV LSWADDKKYV LGPLGLNGAI GKPIKKYHQK LVKPKNHRFA 
SYAAVLNTFP