| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0848 |
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| Symbol | |
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| ID | 5774220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 747812 |
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| End bp | 749020 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641316486 |
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| Product | threonine dehydratase |
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| Protein accession | YP_001582182 |
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| Protein GI | 161528356 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01127] threonine dehydratase, medium form |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00000460563 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGAACCAA CATTTGACGA GATACAAAAA GCAAACTCTA TGCGAGGAAA TGAAATAAAG
AAAACTCCTT TAATTCATTC ACCTACTTTT AGTGAGCTTA CAAAGTCTGA AGTTTATCTT
AAAGCAGAGT TCCGACAAAA AACTGGTTCA TTTAAAATTC GTGGCGCTTA TTACAAAATC
AAATCATTAT CTGATGAAGA AAAGAAACAA GGAGTGGTTG CAGCATCTGC TGGAAATCAT
GCACAAGGTG TTGCATTAGC TTCAGCACTT GAAGAAATTC CTTGTACTAT AGTTATGCCA
AAAAATGCAT CCCCTGCAAA AGTGGCTGCA ACAAAAGGCT ATGGTGCAAA TGTGGTTCTA
GAAGGTGTAA ACTATGATGA ATCTTCTGCA AAAGCAAAAG AGATTGCAAA AGAAACTGGG
GCAACTATGA TACATGCATT TGATGATCCT CAAATTATTG CAGCACAGGG TGTAATTGGT
TTAGAAATAC TAGAGGACTT GCCAGATGTT GATCAAGTGT ATCTTCCAAT AGGTGGTGGA
GGATTGGCTG CAGGTACCTT AATTGCAATT AAAGAAAAAA ACCCCAATGT TCAGGTTATT
GGAGTACAAT CAAGATCTTT TCCATCAATG TATGAATCAG TAAAACAAGG ATCAATCACT
GCAAGTGGAG GTGCAAGAAC AATTGCAGAT GGTATATCAG TAAAAGTTCC AGGACAGTTA
ACGTTTAGTG TAATTAATGA ACTCATAGAC GAAGTTGTTC TAGTAGATGA TACTGAAATT
ACAAAAGCAA TGTTTCTCTT AATGGAGAGG ATGAAATTTG TAGTAGAACC CGCAGGTGCT
GCCAGTTTAG CTTATCTAAT TTCAAAAAAA CCTGCCCCAG GCAAAAAAGT AGTTGCAGTA
TTGGCAGGAG GAAATGTGGA TATGTATCTC TTGGGACAAA TAGTAGACAA AGGTCTTGCT
GCTATGGGTA GATTATTGAA ATTATCAGTA TTGCTACCTG ACAGACCAGG TTCATTCAAA
GAAATTGTTG ATGTCATTAC CCTTGCAAAT GCCAACATTG TAGAAGTTGT TCATGACAGA
TTAAGTTCAA ATGTTAATGC AGGTTCGGCA TCAGTTACTA TGAATTTAGA AACTCAAGGA
AAAGAGCAAG CAGATGCGTT AATTGAAGCA TTAAGAAAGA AAGATGTTCA ATTCACATTA
TTGACATAA
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| Protein sequence | MEPTFDEIQK ANSMRGNEIK KTPLIHSPTF SELTKSEVYL KAEFRQKTGS FKIRGAYYKI
KSLSDEEKKQ GVVAASAGNH AQGVALASAL EEIPCTIVMP KNASPAKVAA TKGYGANVVL
EGVNYDESSA KAKEIAKETG ATMIHAFDDP QIIAAQGVIG LEILEDLPDV DQVYLPIGGG
GLAAGTLIAI KEKNPNVQVI GVQSRSFPSM YESVKQGSIT ASGGARTIAD GISVKVPGQL
TFSVINELID EVVLVDDTEI TKAMFLLMER MKFVVEPAGA ASLAYLISKK PAPGKKVVAV
LAGGNVDMYL LGQIVDKGLA AMGRLLKLSV LLPDRPGSFK EIVDVITLAN ANIVEVVHDR
LSSNVNAGSA SVTMNLETQG KEQADALIEA LRKKDVQFTL LT
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